SMTL ID : 6s1s.1

Crystal structure of AmpC from Pseudomonas aeruginosa in complex with [3-(2-carboxyvinyl)phenyl]boronic acid] inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.78 Å

Oligo State

monomer

Ligands

1 x KRT: (~{E})-3-[3-(dihydroxyboranyl)phenyl]prop-2-enoic acid(Covalent)

KRT.1: 13 residues within 4Å: Chain A: G.89, S.90, K.93, L.145, Q.146, Y.177, N.179, V.239, Y.249, G.344, S.345, T.346, N.347 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:L.145, A:Y.177, A:N.179, A:Y.249 Hydrogen bonds: A:S.90, A:Y.177, A:S.345, A:S.345, A:N.347 Water bridges: A:N.347

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 2 residues within 4Å: Chain A: Q.155, R.191 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.155, A:Q.155 Salt bridges: A:R.191

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Linciano, P. et al., Phenylboronic Acids Probing Molecular Recognition against Class A and Class C beta-lactamases. Antibiotics (2019)

Release Date

2019-10-09

Peptides

Beta-lactamase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-lactamase