SMTL ID : 6sa6.1

DARPin-Armadillo fusion A5

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: H.117, L.118, E.119, I.120 Ligand excluded by PLIP CL.2: 4 residues within 4Å: Chain A: H.84, L.85, E.86, I.87 Ligand excluded by PLIP

7 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 4 residues within 4Å: Chain A: Y.81, T.82, W.115, H.117 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.81 EDO.4: 6 residues within 4Å: Chain A: G.229, G.230, N.231, I.234, S.270, G.271 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.270 Water bridges: A:N.231, A:N.231 EDO.5: 3 residues within 4Å: Chain A: G.17, D.19, H.51 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.51 Water bridges: A:D.19 EDO.6: 5 residues within 4Å: Chain A: K.126, L.156, A.157, A.160, A.161 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.157 Water bridges: A:A.157 EDO.7: 3 residues within 4Å: Chain A: D.323, A.324, G.325 No protein-ligand interaction detected (PLIP) EDO.8: 5 residues within 4Å: Chain A: N.99, T.101, K.130, A.133, K.134 1 PLIP interactions: 1 interactions with chain A Water bridges: A:K.134 EDO.9: 6 residues within 4Å: Chain A: N.315, S.354, G.355, G.356, K.360, H.397 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.355, A:K.360

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ernst, P. et al., Rigid fusions of designed helical repeat binding proteins efficiently protect a binding surface from crystal contacts. Sci Rep (2019)

Release Date

2019-11-20

Peptides

DARPin-Armadillo fusion A5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DARPin-Armadillo fusion A5