- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-40-mer
- Ligands
- 40 x G- A- A: RNA (5'-R(P*GP*AP*A)-3')(Non-covalent)
- 40 x CA: CALCIUM ION(Non-covalent)
CA.2: 2 residues within 4Å:- Chain A: N.102, P.103
3 PLIP interactions:1 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:P.103, H2O.2, H2O.3
CA.8: 4 residues within 4Å:- Chain A: N.99, E.107
- Chain B: N.102, P.103
5 PLIP interactions:1 interactions with chain B, 2 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: B:P.103, A:E.107, A:E.107, H2O.5, H2O.6
CA.14: 4 residues within 4Å:- Chain B: N.99, E.107
- Chain C: N.102, P.103
5 PLIP interactions:2 interactions with chain B, 1 interactions with chain C, 2 Ligand-Water interactions- Metal complexes: B:E.107, B:E.107, C:P.103, H2O.8, H2O.8
CA.20: 4 residues within 4Å:- Chain C: N.99, E.107
- Chain D: N.102, P.103
5 PLIP interactions:2 interactions with chain C, 1 interactions with chain D, 2 Ligand-Water interactions- Metal complexes: C:E.107, C:E.107, D:P.103, H2O.10, H2O.11
CA.26: 4 residues within 4Å:- Chain D: N.99, E.107
- Chain E: N.102, P.103
5 PLIP interactions:2 interactions with chain D, 1 interactions with chain E, 2 Ligand-Water interactions- Metal complexes: D:E.107, D:E.107, E:P.103, H2O.13, H2O.14
CA.32: 4 residues within 4Å:- Chain E: N.99, E.107
- Chain F: N.102, P.103
5 PLIP interactions:1 interactions with chain F, 2 interactions with chain E, 2 Ligand-Water interactions- Metal complexes: F:P.103, E:E.107, E:E.107, H2O.16, H2O.16
CA.38: 4 residues within 4Å:- Chain F: N.99, E.107
- Chain G: N.102, P.103
5 PLIP interactions:1 interactions with chain G, 2 interactions with chain F, 2 Ligand-Water interactions- Metal complexes: G:P.103, F:E.107, F:E.107, H2O.19, H2O.19
CA.44: 4 residues within 4Å:- Chain G: N.99, E.107
- Chain H: N.102, P.103
5 PLIP interactions:2 interactions with chain G, 1 interactions with chain H, 2 Ligand-Water interactions- Metal complexes: G:E.107, G:E.107, H:P.103, H2O.21, H2O.22
CA.50: 4 residues within 4Å:- Chain H: N.99, E.107
- Chain I: N.102, P.103
5 PLIP interactions:1 interactions with chain I, 2 interactions with chain H, 2 Ligand-Water interactions- Metal complexes: I:P.103, H:E.107, H:E.107, H2O.24, H2O.25
CA.56: 4 residues within 4Å:- Chain I: N.99, E.107
- Chain J: N.102, P.103
5 PLIP interactions:1 interactions with chain J, 2 interactions with chain I, 2 Ligand-Water interactions- Metal complexes: J:P.103, I:E.107, I:E.107, H2O.27, H2O.27
CA.62: 4 residues within 4Å:- Chain J: N.99, E.107
- Chain K: N.102, P.103
5 PLIP interactions:1 interactions with chain K, 2 interactions with chain J, 2 Ligand-Water interactions- Metal complexes: K:P.103, J:E.107, J:E.107, H2O.30, H2O.30
CA.68: 4 residues within 4Å:- Chain K: N.99, E.107
- Chain L: N.102, P.103
5 PLIP interactions:2 interactions with chain K, 1 interactions with chain L, 2 Ligand-Water interactions- Metal complexes: K:E.107, K:E.107, L:P.103, H2O.32, H2O.33
CA.74: 4 residues within 4Å:- Chain L: N.99, E.107
- Chain M: N.102, P.103
5 PLIP interactions:2 interactions with chain L, 1 interactions with chain M, 2 Ligand-Water interactions- Metal complexes: L:E.107, L:E.107, M:P.103, H2O.35, H2O.36
CA.80: 4 residues within 4Å:- Chain M: N.99, E.107
- Chain N: N.102, P.103
5 PLIP interactions:1 interactions with chain N, 2 interactions with chain M, 2 Ligand-Water interactions- Metal complexes: N:P.103, M:E.107, M:E.107, H2O.38, H2O.38
CA.86: 4 residues within 4Å:- Chain N: N.99, E.107
- Chain O: N.102, P.103
5 PLIP interactions:1 interactions with chain O, 2 interactions with chain N, 2 Ligand-Water interactions- Metal complexes: O:P.103, N:E.107, N:E.107, H2O.41, H2O.41
CA.92: 4 residues within 4Å:- Chain O: N.99, E.107
- Chain P: N.102, P.103
5 PLIP interactions:2 interactions with chain O, 1 interactions with chain P, 2 Ligand-Water interactions- Metal complexes: O:E.107, O:E.107, P:P.103, H2O.43, H2O.44
CA.98: 4 residues within 4Å:- Chain P: N.99, E.107
- Chain Q: N.102, P.103
5 PLIP interactions:1 interactions with chain Q, 2 interactions with chain P, 2 Ligand-Water interactions- Metal complexes: Q:P.103, P:E.107, P:E.107, H2O.46, H2O.46
CA.104: 4 residues within 4Å:- Chain Q: N.99, E.107
- Chain R: N.102, P.103
5 PLIP interactions:1 interactions with chain R, 2 interactions with chain Q, 2 Ligand-Water interactions- Metal complexes: R:P.103, Q:E.107, Q:E.107, H2O.49, H2O.49
CA.110: 4 residues within 4Å:- Chain R: N.99, E.107
- Chain S: N.102, P.103
5 PLIP interactions:1 interactions with chain S, 2 interactions with chain R, 2 Ligand-Water interactions- Metal complexes: S:P.103, R:E.107, R:E.107, H2O.51, H2O.52
CA.116: 4 residues within 4Å:- Chain S: N.99, E.107
- Chain T: N.102, P.103
5 PLIP interactions:1 interactions with chain T, 2 interactions with chain S, 2 Ligand-Water interactions- Metal complexes: T:P.103, S:E.107, S:E.107, H2O.54, H2O.55
CA.122: 4 residues within 4Å:- Chain T: N.99, E.107
- Chain U: N.102, P.103
5 PLIP interactions:1 interactions with chain U, 2 interactions with chain T, 2 Ligand-Water interactions- Metal complexes: U:P.103, T:E.107, T:E.107, H2O.57, H2O.57
CA.128: 4 residues within 4Å:- Chain U: N.99, E.107
- Chain V: N.102, P.103
5 PLIP interactions:1 interactions with chain V, 2 interactions with chain U, 2 Ligand-Water interactions- Metal complexes: V:P.103, U:E.107, U:E.107, H2O.60, H2O.60
CA.134: 4 residues within 4Å:- Chain V: N.99, E.107
- Chain W: N.102, P.103
5 PLIP interactions:2 interactions with chain V, 1 interactions with chain W, 2 Ligand-Water interactions- Metal complexes: V:E.107, V:E.107, W:P.103, H2O.62, H2O.63
CA.140: 4 residues within 4Å:- Chain W: N.99, E.107
- Chain X: N.102, P.103
5 PLIP interactions:1 interactions with chain X, 2 interactions with chain W, 2 Ligand-Water interactions- Metal complexes: X:P.103, W:E.107, W:E.107, H2O.65, H2O.66
CA.146: 4 residues within 4Å:- Chain X: N.99, E.107
- Chain Y: N.102, P.103
5 PLIP interactions:1 interactions with chain Y, 2 interactions with chain X, 2 Ligand-Water interactions- Metal complexes: Y:P.103, X:E.107, X:E.107, H2O.68, H2O.68
CA.152: 4 residues within 4Å:- Chain Y: N.99, E.107
- Chain Z: N.102, P.103
5 PLIP interactions:1 interactions with chain Z, 2 interactions with chain Y, 2 Ligand-Water interactions- Metal complexes: Z:P.103, Y:E.107, Y:E.107, H2O.71, H2O.71
CA.158: 4 residues within 4Å:- Chain 0: N.102, P.103
- Chain Z: N.99, E.107
5 PLIP interactions:1 interactions with chain 0, 2 interactions with chain Z, 2 Ligand-Water interactions- Metal complexes: 0:P.103, Z:E.107, Z:E.107, H2O.73, H2O.74
CA.164: 4 residues within 4Å:- Chain 0: N.99, E.107
- Chain 1: N.102, P.103
5 PLIP interactions:2 interactions with chain 0, 1 interactions with chain 1, 2 Ligand-Water interactions- Metal complexes: 0:E.107, 0:E.107, 1:P.103, H2O.76, H2O.77
CA.170: 4 residues within 4Å:- Chain 1: N.99, E.107
- Chain 2: N.102, P.103
5 PLIP interactions:1 interactions with chain 2, 2 interactions with chain 1, 2 Ligand-Water interactions- Metal complexes: 2:P.103, 1:E.107, 1:E.107, H2O.79, H2O.79
CA.176: 4 residues within 4Å:- Chain 2: N.99, E.107
- Chain 3: N.102, P.103
5 PLIP interactions:1 interactions with chain 3, 2 interactions with chain 2, 2 Ligand-Water interactions- Metal complexes: 3:P.103, 2:E.107, 2:E.107, H2O.81, H2O.82
CA.182: 4 residues within 4Å:- Chain 3: N.99, E.107
- Chain 4: N.102, P.103
5 PLIP interactions:1 interactions with chain 4, 2 interactions with chain 3, 2 Ligand-Water interactions- Metal complexes: 4:P.103, 3:E.107, 3:E.107, H2O.84, H2O.85
CA.188: 4 residues within 4Å:- Chain 4: N.99, E.107
- Chain 5: N.102, P.103
5 PLIP interactions:1 interactions with chain 5, 2 interactions with chain 4, 2 Ligand-Water interactions- Metal complexes: 5:P.103, 4:E.107, 4:E.107, H2O.87, H2O.87
CA.194: 4 residues within 4Å:- Chain 5: N.99, E.107
- Chain 6: N.102, P.103
5 PLIP interactions:2 interactions with chain 5, 1 interactions with chain 6, 2 Ligand-Water interactions- Metal complexes: 5:E.107, 5:E.107, 6:P.103, H2O.90, H2O.90
CA.200: 4 residues within 4Å:- Chain 6: N.99, E.107
- Chain 7: N.102, P.103
5 PLIP interactions:2 interactions with chain 6, 1 interactions with chain 7, 2 Ligand-Water interactions- Metal complexes: 6:E.107, 6:E.107, 7:P.103, H2O.92, H2O.93
CA.206: 4 residues within 4Å:- Chain 7: N.99, E.107
- Chain 8: N.102, P.103
5 PLIP interactions:2 interactions with chain 7, 1 interactions with chain 8, 2 Ligand-Water interactions- Metal complexes: 7:E.107, 7:E.107, 8:P.103, H2O.95, H2O.96
CA.212: 4 residues within 4Å:- Chain 8: N.99, E.107
- Chain 9: N.102, P.103
5 PLIP interactions:1 interactions with chain 9, 2 interactions with chain 8, 2 Ligand-Water interactions- Metal complexes: 9:P.103, 8:E.107, 8:E.107, H2O.98, H2O.98
CA.218: 4 residues within 4Å:- Chain 9: N.99, E.107
- Chain a: N.102, P.103
5 PLIP interactions:1 interactions with chain a, 2 interactions with chain 9, 2 Ligand-Water interactions- Metal complexes: a:P.103, 9:E.107, 9:E.107, H2O.101, H2O.101
CA.224: 4 residues within 4Å:- Chain a: N.99, E.107
- Chain b: N.102, P.103
5 PLIP interactions:1 interactions with chain b, 2 interactions with chain a, 2 Ligand-Water interactions- Metal complexes: b:P.103, a:E.107, a:E.107, H2O.103, H2O.104
CA.230: 4 residues within 4Å:- Chain b: N.99, E.107
- Chain c: N.102, P.103
5 PLIP interactions:1 interactions with chain c, 2 interactions with chain b, 2 Ligand-Water interactions- Metal complexes: c:P.103, b:E.107, b:E.107, H2O.106, H2O.107
CA.236: 4 residues within 4Å:- Chain c: N.99, E.107
- Chain d: N.102, P.103
5 PLIP interactions:1 interactions with chain d, 2 interactions with chain c, 2 Ligand-Water interactions- Metal complexes: d:P.103, c:E.107, c:E.107, H2O.109, H2O.109
- 160 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
MG.3: 3 residues within 4Å:- Ligands: G-A-A.1, G-A-A.1, MG.5
No protein-ligand interaction detected (PLIP)MG.4: 1 residues within 4Å:- Ligands: G-A-A.1
No protein-ligand interaction detected (PLIP)MG.5: 3 residues within 4Å:- Ligands: G-A-A.1, G-A-A.1, MG.3
No protein-ligand interaction detected (PLIP)MG.6: 1 residues within 4Å:- Ligands: G-A-A.1
No protein-ligand interaction detected (PLIP)MG.9: 3 residues within 4Å:- Ligands: G-A-A.7, G-A-A.7, MG.11
No protein-ligand interaction detected (PLIP)MG.10: 2 residues within 4Å:- Ligands: G-A-A.1, G-A-A.7
No protein-ligand interaction detected (PLIP)MG.11: 3 residues within 4Å:- Ligands: G-A-A.7, G-A-A.7, MG.9
No protein-ligand interaction detected (PLIP)MG.12: 2 residues within 4Å:- Ligands: G-A-A.1, G-A-A.7
No protein-ligand interaction detected (PLIP)MG.15: 3 residues within 4Å:- Ligands: G-A-A.13, G-A-A.13, MG.17
No protein-ligand interaction detected (PLIP)MG.16: 2 residues within 4Å:- Ligands: G-A-A.7, G-A-A.13
No protein-ligand interaction detected (PLIP)MG.17: 3 residues within 4Å:- Ligands: G-A-A.13, G-A-A.13, MG.15
No protein-ligand interaction detected (PLIP)MG.18: 2 residues within 4Å:- Ligands: G-A-A.7, G-A-A.13
No protein-ligand interaction detected (PLIP)MG.21: 3 residues within 4Å:- Ligands: G-A-A.19, G-A-A.19, MG.23
No protein-ligand interaction detected (PLIP)MG.22: 2 residues within 4Å:- Ligands: G-A-A.13, G-A-A.19
No protein-ligand interaction detected (PLIP)MG.23: 3 residues within 4Å:- Ligands: G-A-A.19, G-A-A.19, MG.21
No protein-ligand interaction detected (PLIP)MG.24: 2 residues within 4Å:- Ligands: G-A-A.13, G-A-A.19
No protein-ligand interaction detected (PLIP)MG.27: 3 residues within 4Å:- Ligands: G-A-A.25, G-A-A.25, MG.29
No protein-ligand interaction detected (PLIP)MG.28: 2 residues within 4Å:- Ligands: G-A-A.19, G-A-A.25
No protein-ligand interaction detected (PLIP)MG.29: 3 residues within 4Å:- Ligands: G-A-A.25, G-A-A.25, MG.27
No protein-ligand interaction detected (PLIP)MG.30: 2 residues within 4Å:- Ligands: G-A-A.19, G-A-A.25
No protein-ligand interaction detected (PLIP)MG.33: 3 residues within 4Å:- Ligands: G-A-A.31, G-A-A.31, MG.35
No protein-ligand interaction detected (PLIP)MG.34: 2 residues within 4Å:- Ligands: G-A-A.25, G-A-A.31
No protein-ligand interaction detected (PLIP)MG.35: 3 residues within 4Å:- Ligands: G-A-A.31, G-A-A.31, MG.33
No protein-ligand interaction detected (PLIP)MG.36: 2 residues within 4Å:- Ligands: G-A-A.25, G-A-A.31
No protein-ligand interaction detected (PLIP)MG.39: 3 residues within 4Å:- Ligands: G-A-A.37, G-A-A.37, MG.41
No protein-ligand interaction detected (PLIP)MG.40: 2 residues within 4Å:- Ligands: G-A-A.31, G-A-A.37
No protein-ligand interaction detected (PLIP)MG.41: 3 residues within 4Å:- Ligands: G-A-A.37, G-A-A.37, MG.39
No protein-ligand interaction detected (PLIP)MG.42: 2 residues within 4Å:- Ligands: G-A-A.31, G-A-A.37
No protein-ligand interaction detected (PLIP)MG.45: 3 residues within 4Å:- Ligands: G-A-A.43, G-A-A.43, MG.47
No protein-ligand interaction detected (PLIP)MG.46: 2 residues within 4Å:- Ligands: G-A-A.37, G-A-A.43
No protein-ligand interaction detected (PLIP)MG.47: 3 residues within 4Å:- Ligands: G-A-A.43, G-A-A.43, MG.45
No protein-ligand interaction detected (PLIP)MG.48: 2 residues within 4Å:- Ligands: G-A-A.37, G-A-A.43
No protein-ligand interaction detected (PLIP)MG.51: 3 residues within 4Å:- Ligands: G-A-A.49, G-A-A.49, MG.53
No protein-ligand interaction detected (PLIP)MG.52: 2 residues within 4Å:- Ligands: G-A-A.43, G-A-A.49
No protein-ligand interaction detected (PLIP)MG.53: 3 residues within 4Å:- Ligands: G-A-A.49, G-A-A.49, MG.51
No protein-ligand interaction detected (PLIP)MG.54: 2 residues within 4Å:- Ligands: G-A-A.43, G-A-A.49
No protein-ligand interaction detected (PLIP)MG.57: 3 residues within 4Å:- Ligands: G-A-A.55, G-A-A.55, MG.59
No protein-ligand interaction detected (PLIP)MG.58: 2 residues within 4Å:- Ligands: G-A-A.49, G-A-A.55
No protein-ligand interaction detected (PLIP)MG.59: 3 residues within 4Å:- Ligands: G-A-A.55, G-A-A.55, MG.57
No protein-ligand interaction detected (PLIP)MG.60: 2 residues within 4Å:- Ligands: G-A-A.49, G-A-A.55
No protein-ligand interaction detected (PLIP)MG.63: 3 residues within 4Å:- Ligands: G-A-A.61, G-A-A.61, MG.65
No protein-ligand interaction detected (PLIP)MG.64: 2 residues within 4Å:- Ligands: G-A-A.55, G-A-A.61
No protein-ligand interaction detected (PLIP)MG.65: 3 residues within 4Å:- Ligands: G-A-A.61, G-A-A.61, MG.63
No protein-ligand interaction detected (PLIP)MG.66: 2 residues within 4Å:- Ligands: G-A-A.55, G-A-A.61
No protein-ligand interaction detected (PLIP)MG.69: 3 residues within 4Å:- Ligands: G-A-A.67, G-A-A.67, MG.71
No protein-ligand interaction detected (PLIP)MG.70: 2 residues within 4Å:- Ligands: G-A-A.61, G-A-A.67
No protein-ligand interaction detected (PLIP)MG.71: 3 residues within 4Å:- Ligands: G-A-A.67, G-A-A.67, MG.69
No protein-ligand interaction detected (PLIP)MG.72: 2 residues within 4Å:- Ligands: G-A-A.61, G-A-A.67
No protein-ligand interaction detected (PLIP)MG.75: 3 residues within 4Å:- Ligands: G-A-A.73, G-A-A.73, MG.77
No protein-ligand interaction detected (PLIP)MG.76: 2 residues within 4Å:- Ligands: G-A-A.67, G-A-A.73
No protein-ligand interaction detected (PLIP)MG.77: 3 residues within 4Å:- Ligands: G-A-A.73, G-A-A.73, MG.75
No protein-ligand interaction detected (PLIP)MG.78: 2 residues within 4Å:- Ligands: G-A-A.67, G-A-A.73
No protein-ligand interaction detected (PLIP)MG.81: 3 residues within 4Å:- Ligands: G-A-A.79, G-A-A.79, MG.83
No protein-ligand interaction detected (PLIP)MG.82: 2 residues within 4Å:- Ligands: G-A-A.73, G-A-A.79
No protein-ligand interaction detected (PLIP)MG.83: 3 residues within 4Å:- Ligands: G-A-A.79, G-A-A.79, MG.81
No protein-ligand interaction detected (PLIP)MG.84: 2 residues within 4Å:- Ligands: G-A-A.73, G-A-A.79
No protein-ligand interaction detected (PLIP)MG.87: 3 residues within 4Å:- Ligands: G-A-A.85, G-A-A.85, MG.89
No protein-ligand interaction detected (PLIP)MG.88: 2 residues within 4Å:- Ligands: G-A-A.79, G-A-A.85
No protein-ligand interaction detected (PLIP)MG.89: 3 residues within 4Å:- Ligands: G-A-A.85, G-A-A.85, MG.87
No protein-ligand interaction detected (PLIP)MG.90: 2 residues within 4Å:- Ligands: G-A-A.79, G-A-A.85
No protein-ligand interaction detected (PLIP)MG.93: 3 residues within 4Å:- Ligands: G-A-A.91, G-A-A.91, MG.95
No protein-ligand interaction detected (PLIP)MG.94: 2 residues within 4Å:- Ligands: G-A-A.85, G-A-A.91
No protein-ligand interaction detected (PLIP)MG.95: 3 residues within 4Å:- Ligands: G-A-A.91, G-A-A.91, MG.93
No protein-ligand interaction detected (PLIP)MG.96: 2 residues within 4Å:- Ligands: G-A-A.85, G-A-A.91
No protein-ligand interaction detected (PLIP)MG.99: 3 residues within 4Å:- Ligands: G-A-A.97, G-A-A.97, MG.101
No protein-ligand interaction detected (PLIP)MG.100: 2 residues within 4Å:- Ligands: G-A-A.91, G-A-A.97
No protein-ligand interaction detected (PLIP)MG.101: 4 residues within 4Å:- Chain A: T.38
- Ligands: G-A-A.97, G-A-A.97, MG.99
No protein-ligand interaction detected (PLIP)MG.102: 2 residues within 4Å:- Ligands: G-A-A.91, G-A-A.97
No protein-ligand interaction detected (PLIP)MG.105: 5 residues within 4Å:- Chain A: R.91, R.93
- Ligands: G-A-A.103, G-A-A.103, MG.107
No protein-ligand interaction detected (PLIP)MG.106: 5 residues within 4Å:- Chain A: Q.39, R.91, N.92
- Ligands: G-A-A.97, G-A-A.103
No protein-ligand interaction detected (PLIP)MG.107: 5 residues within 4Å:- Chain A: R.93
- Chain B: T.38
- Ligands: G-A-A.103, G-A-A.103, MG.105
No protein-ligand interaction detected (PLIP)MG.108: 3 residues within 4Å:- Chain A: Q.39
- Ligands: G-A-A.97, G-A-A.103
No protein-ligand interaction detected (PLIP)MG.111: 5 residues within 4Å:- Chain B: R.91, R.93
- Ligands: G-A-A.109, G-A-A.109, MG.113
No protein-ligand interaction detected (PLIP)MG.112: 5 residues within 4Å:- Chain B: Q.39, R.91, N.92
- Ligands: G-A-A.103, G-A-A.109
No protein-ligand interaction detected (PLIP)MG.113: 5 residues within 4Å:- Chain B: R.93
- Chain C: T.38
- Ligands: G-A-A.109, G-A-A.109, MG.111
No protein-ligand interaction detected (PLIP)MG.114: 3 residues within 4Å:- Chain B: Q.39
- Ligands: G-A-A.103, G-A-A.109
No protein-ligand interaction detected (PLIP)MG.117: 5 residues within 4Å:- Chain C: R.91, R.93
- Ligands: G-A-A.115, G-A-A.115, MG.119
No protein-ligand interaction detected (PLIP)MG.118: 5 residues within 4Å:- Chain C: Q.39, R.91, N.92
- Ligands: G-A-A.109, G-A-A.115
No protein-ligand interaction detected (PLIP)MG.119: 5 residues within 4Å:- Chain C: R.93
- Chain D: T.38
- Ligands: G-A-A.115, G-A-A.115, MG.117
No protein-ligand interaction detected (PLIP)MG.120: 3 residues within 4Å:- Chain C: Q.39
- Ligands: G-A-A.109, G-A-A.115
No protein-ligand interaction detected (PLIP)MG.123: 5 residues within 4Å:- Chain D: R.91, R.93
- Ligands: G-A-A.121, G-A-A.121, MG.125
No protein-ligand interaction detected (PLIP)MG.124: 5 residues within 4Å:- Chain D: Q.39, R.91, N.92
- Ligands: G-A-A.115, G-A-A.121
No protein-ligand interaction detected (PLIP)MG.125: 5 residues within 4Å:- Chain D: R.93
- Chain E: T.38
- Ligands: G-A-A.121, G-A-A.121, MG.123
No protein-ligand interaction detected (PLIP)MG.126: 3 residues within 4Å:- Chain D: Q.39
- Ligands: G-A-A.115, G-A-A.121
No protein-ligand interaction detected (PLIP)MG.129: 5 residues within 4Å:- Chain E: R.91, R.93
- Ligands: G-A-A.127, G-A-A.127, MG.131
No protein-ligand interaction detected (PLIP)MG.130: 5 residues within 4Å:- Chain E: Q.39, R.91, N.92
- Ligands: G-A-A.121, G-A-A.127
No protein-ligand interaction detected (PLIP)MG.131: 5 residues within 4Å:- Chain E: R.93
- Chain F: T.38
- Ligands: G-A-A.127, G-A-A.127, MG.129
No protein-ligand interaction detected (PLIP)MG.132: 3 residues within 4Å:- Chain E: Q.39
- Ligands: G-A-A.121, G-A-A.127
No protein-ligand interaction detected (PLIP)MG.135: 5 residues within 4Å:- Chain F: R.91, R.93
- Ligands: G-A-A.133, G-A-A.133, MG.137
No protein-ligand interaction detected (PLIP)MG.136: 5 residues within 4Å:- Chain F: Q.39, R.91, N.92
- Ligands: G-A-A.127, G-A-A.133
No protein-ligand interaction detected (PLIP)MG.137: 5 residues within 4Å:- Chain F: R.93
- Chain G: T.38
- Ligands: G-A-A.133, G-A-A.133, MG.135
No protein-ligand interaction detected (PLIP)MG.138: 3 residues within 4Å:- Chain F: Q.39
- Ligands: G-A-A.127, G-A-A.133
No protein-ligand interaction detected (PLIP)MG.141: 5 residues within 4Å:- Chain G: R.91, R.93
- Ligands: G-A-A.139, G-A-A.139, MG.143
No protein-ligand interaction detected (PLIP)MG.142: 5 residues within 4Å:- Chain G: Q.39, R.91, N.92
- Ligands: G-A-A.133, G-A-A.139
No protein-ligand interaction detected (PLIP)MG.143: 5 residues within 4Å:- Chain G: R.93
- Chain H: T.38
- Ligands: G-A-A.139, G-A-A.139, MG.141
No protein-ligand interaction detected (PLIP)MG.144: 3 residues within 4Å:- Chain G: Q.39
- Ligands: G-A-A.133, G-A-A.139
No protein-ligand interaction detected (PLIP)MG.147: 5 residues within 4Å:- Chain H: R.91, R.93
- Ligands: G-A-A.145, G-A-A.145, MG.149
No protein-ligand interaction detected (PLIP)MG.148: 5 residues within 4Å:- Chain H: Q.39, R.91, N.92
- Ligands: G-A-A.139, G-A-A.145
No protein-ligand interaction detected (PLIP)MG.149: 5 residues within 4Å:- Chain H: R.93
- Chain I: T.38
- Ligands: G-A-A.145, G-A-A.145, MG.147
No protein-ligand interaction detected (PLIP)MG.150: 3 residues within 4Å:- Chain H: Q.39
- Ligands: G-A-A.139, G-A-A.145
No protein-ligand interaction detected (PLIP)MG.153: 5 residues within 4Å:- Chain I: R.91, R.93
- Ligands: G-A-A.151, G-A-A.151, MG.155
No protein-ligand interaction detected (PLIP)MG.154: 5 residues within 4Å:- Chain I: Q.39, R.91, N.92
- Ligands: G-A-A.145, G-A-A.151
No protein-ligand interaction detected (PLIP)MG.155: 5 residues within 4Å:- Chain I: R.93
- Chain J: T.38
- Ligands: G-A-A.151, G-A-A.151, MG.153
No protein-ligand interaction detected (PLIP)MG.156: 3 residues within 4Å:- Chain I: Q.39
- Ligands: G-A-A.145, G-A-A.151
No protein-ligand interaction detected (PLIP)MG.159: 5 residues within 4Å:- Chain J: R.91, R.93
- Ligands: G-A-A.157, G-A-A.157, MG.161
No protein-ligand interaction detected (PLIP)MG.160: 5 residues within 4Å:- Chain J: Q.39, R.91, N.92
- Ligands: G-A-A.151, G-A-A.157
No protein-ligand interaction detected (PLIP)MG.161: 5 residues within 4Å:- Chain J: R.93
- Chain K: T.38
- Ligands: G-A-A.157, G-A-A.157, MG.159
No protein-ligand interaction detected (PLIP)MG.162: 3 residues within 4Å:- Chain J: Q.39
- Ligands: G-A-A.151, G-A-A.157
No protein-ligand interaction detected (PLIP)MG.165: 5 residues within 4Å:- Chain K: R.91, R.93
- Ligands: G-A-A.163, G-A-A.163, MG.167
No protein-ligand interaction detected (PLIP)MG.166: 5 residues within 4Å:- Chain K: Q.39, R.91, N.92
- Ligands: G-A-A.157, G-A-A.163
No protein-ligand interaction detected (PLIP)MG.167: 5 residues within 4Å:- Chain K: R.93
- Chain L: T.38
- Ligands: G-A-A.163, G-A-A.163, MG.165
No protein-ligand interaction detected (PLIP)MG.168: 3 residues within 4Å:- Chain K: Q.39
- Ligands: G-A-A.157, G-A-A.163
No protein-ligand interaction detected (PLIP)MG.171: 5 residues within 4Å:- Chain L: R.91, R.93
- Ligands: G-A-A.169, G-A-A.169, MG.173
No protein-ligand interaction detected (PLIP)MG.172: 5 residues within 4Å:- Chain L: Q.39, R.91, N.92
- Ligands: G-A-A.163, G-A-A.169
No protein-ligand interaction detected (PLIP)MG.173: 5 residues within 4Å:- Chain L: R.93
- Chain M: T.38
- Ligands: G-A-A.169, G-A-A.169, MG.171
No protein-ligand interaction detected (PLIP)MG.174: 3 residues within 4Å:- Chain L: Q.39
- Ligands: G-A-A.163, G-A-A.169
No protein-ligand interaction detected (PLIP)MG.177: 5 residues within 4Å:- Chain M: R.91, R.93
- Ligands: G-A-A.175, G-A-A.175, MG.179
No protein-ligand interaction detected (PLIP)MG.178: 5 residues within 4Å:- Chain M: Q.39, R.91, N.92
- Ligands: G-A-A.169, G-A-A.175
No protein-ligand interaction detected (PLIP)MG.179: 5 residues within 4Å:- Chain M: R.93
- Chain N: T.38
- Ligands: G-A-A.175, G-A-A.175, MG.177
No protein-ligand interaction detected (PLIP)MG.180: 3 residues within 4Å:- Chain M: Q.39
- Ligands: G-A-A.169, G-A-A.175
No protein-ligand interaction detected (PLIP)MG.183: 5 residues within 4Å:- Chain N: R.91, R.93
- Ligands: G-A-A.181, G-A-A.181, MG.185
No protein-ligand interaction detected (PLIP)MG.184: 5 residues within 4Å:- Chain N: Q.39, R.91, N.92
- Ligands: G-A-A.175, G-A-A.181
No protein-ligand interaction detected (PLIP)MG.185: 5 residues within 4Å:- Chain N: R.93
- Chain O: T.38
- Ligands: G-A-A.181, G-A-A.181, MG.183
No protein-ligand interaction detected (PLIP)MG.186: 3 residues within 4Å:- Chain N: Q.39
- Ligands: G-A-A.175, G-A-A.181
No protein-ligand interaction detected (PLIP)MG.189: 5 residues within 4Å:- Chain O: R.91, R.93
- Ligands: G-A-A.187, G-A-A.187, MG.191
No protein-ligand interaction detected (PLIP)MG.190: 5 residues within 4Å:- Chain O: Q.39, R.91, N.92
- Ligands: G-A-A.181, G-A-A.187
No protein-ligand interaction detected (PLIP)MG.191: 5 residues within 4Å:- Chain O: R.93
- Chain P: T.38
- Ligands: G-A-A.187, G-A-A.187, MG.189
No protein-ligand interaction detected (PLIP)MG.192: 3 residues within 4Å:- Chain O: Q.39
- Ligands: G-A-A.181, G-A-A.187
No protein-ligand interaction detected (PLIP)MG.195: 5 residues within 4Å:- Chain P: R.91, R.93
- Ligands: G-A-A.193, G-A-A.193, MG.197
No protein-ligand interaction detected (PLIP)MG.196: 5 residues within 4Å:- Chain P: Q.39, R.91, N.92
- Ligands: G-A-A.187, G-A-A.193
No protein-ligand interaction detected (PLIP)MG.197: 5 residues within 4Å:- Chain P: R.93
- Chain Q: T.38
- Ligands: G-A-A.193, G-A-A.193, MG.195
No protein-ligand interaction detected (PLIP)MG.198: 3 residues within 4Å:- Chain P: Q.39
- Ligands: G-A-A.187, G-A-A.193
No protein-ligand interaction detected (PLIP)MG.201: 5 residues within 4Å:- Chain Q: R.91, R.93
- Ligands: G-A-A.199, G-A-A.199, MG.203
No protein-ligand interaction detected (PLIP)MG.202: 5 residues within 4Å:- Chain Q: Q.39, R.91, N.92
- Ligands: G-A-A.193, G-A-A.199
No protein-ligand interaction detected (PLIP)MG.203: 5 residues within 4Å:- Chain Q: R.93
- Chain R: T.38
- Ligands: G-A-A.199, G-A-A.199, MG.201
No protein-ligand interaction detected (PLIP)MG.204: 3 residues within 4Å:- Chain Q: Q.39
- Ligands: G-A-A.193, G-A-A.199
No protein-ligand interaction detected (PLIP)MG.207: 5 residues within 4Å:- Chain R: R.91, R.93
- Ligands: G-A-A.205, G-A-A.205, MG.209
No protein-ligand interaction detected (PLIP)MG.208: 5 residues within 4Å:- Chain R: Q.39, R.91, N.92
- Ligands: G-A-A.199, G-A-A.205
No protein-ligand interaction detected (PLIP)MG.209: 5 residues within 4Å:- Chain R: R.93
- Chain S: T.38
- Ligands: G-A-A.205, G-A-A.205, MG.207
No protein-ligand interaction detected (PLIP)MG.210: 3 residues within 4Å:- Chain R: Q.39
- Ligands: G-A-A.199, G-A-A.205
No protein-ligand interaction detected (PLIP)MG.213: 5 residues within 4Å:- Chain S: R.91, R.93
- Ligands: G-A-A.211, G-A-A.211, MG.215
No protein-ligand interaction detected (PLIP)MG.214: 5 residues within 4Å:- Chain S: Q.39, R.91, N.92
- Ligands: G-A-A.205, G-A-A.211
No protein-ligand interaction detected (PLIP)MG.215: 5 residues within 4Å:- Chain S: R.93
- Chain T: T.38
- Ligands: G-A-A.211, G-A-A.211, MG.213
No protein-ligand interaction detected (PLIP)MG.216: 3 residues within 4Å:- Chain S: Q.39
- Ligands: G-A-A.205, G-A-A.211
No protein-ligand interaction detected (PLIP)MG.219: 5 residues within 4Å:- Chain T: R.91, R.93
- Ligands: G-A-A.217, G-A-A.217, MG.221
No protein-ligand interaction detected (PLIP)MG.220: 5 residues within 4Å:- Chain T: Q.39, R.91, N.92
- Ligands: G-A-A.211, G-A-A.217
No protein-ligand interaction detected (PLIP)MG.221: 5 residues within 4Å:- Chain T: R.93
- Chain U: T.38
- Ligands: G-A-A.217, G-A-A.217, MG.219
No protein-ligand interaction detected (PLIP)MG.222: 3 residues within 4Å:- Chain T: Q.39
- Ligands: G-A-A.211, G-A-A.217
No protein-ligand interaction detected (PLIP)MG.225: 5 residues within 4Å:- Chain U: R.91, R.93
- Ligands: G-A-A.223, G-A-A.223, MG.227
No protein-ligand interaction detected (PLIP)MG.226: 5 residues within 4Å:- Chain U: Q.39, R.91, N.92
- Ligands: G-A-A.217, G-A-A.223
No protein-ligand interaction detected (PLIP)MG.227: 5 residues within 4Å:- Chain U: R.93
- Chain V: T.38
- Ligands: G-A-A.223, G-A-A.223, MG.225
No protein-ligand interaction detected (PLIP)MG.228: 3 residues within 4Å:- Chain U: Q.39
- Ligands: G-A-A.217, G-A-A.223
No protein-ligand interaction detected (PLIP)MG.231: 5 residues within 4Å:- Chain V: R.91, R.93
- Ligands: G-A-A.229, G-A-A.229, MG.233
No protein-ligand interaction detected (PLIP)MG.232: 5 residues within 4Å:- Chain V: Q.39, R.91, N.92
- Ligands: G-A-A.223, G-A-A.229
No protein-ligand interaction detected (PLIP)MG.233: 5 residues within 4Å:- Chain V: R.93
- Chain W: T.38
- Ligands: G-A-A.229, G-A-A.229, MG.231
No protein-ligand interaction detected (PLIP)MG.234: 3 residues within 4Å:- Chain V: Q.39
- Ligands: G-A-A.223, G-A-A.229
No protein-ligand interaction detected (PLIP)MG.237: 5 residues within 4Å:- Chain W: R.91, R.93
- Ligands: G-A-A.235, G-A-A.235, MG.239
No protein-ligand interaction detected (PLIP)MG.238: 5 residues within 4Å:- Chain W: Q.39, R.91, N.92
- Ligands: G-A-A.229, G-A-A.235
No protein-ligand interaction detected (PLIP)MG.239: 5 residues within 4Å:- Chain W: R.93
- Chain X: T.38
- Ligands: G-A-A.235, G-A-A.235, MG.237
No protein-ligand interaction detected (PLIP)MG.240: 3 residues within 4Å:- Chain W: Q.39
- Ligands: G-A-A.229, G-A-A.235
No protein-ligand interaction detected (PLIP)- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Weis, F. et al., Elucidation of the viral disassembly switch of tobacco mosaic virus. Embo Rep. (2019)
- Release Date
- 2019-09-18
- Peptides
- Capsid protein: ABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789abcd
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
AY
AZ
A0
A1
A2
A3
A4
A5
A6
A7
A8
A9
Aa
Ab
Ac
Ad
A
- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- homo-40-mer
- Ligands
- 40 x G- A- A: RNA (5'-R(P*GP*AP*A)-3')(Non-covalent)
- 40 x CA: CALCIUM ION(Non-covalent)
- 160 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Weis, F. et al., Elucidation of the viral disassembly switch of tobacco mosaic virus. Embo Rep. (2019)
- Release Date
- 2019-09-18
- Peptides
- Capsid protein: ABCDEFGHIJKLMNOPQRSTUVWXYZ0123456789abcd
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
AI
AJ
AK
AL
AM
AN
AO
AP
AQ
AR
AS
AT
AU
AV
AW
AX
AY
AZ
A0
A1
A2
A3
A4
A5
A6
A7
A8
A9
Aa
Ab
Ac
Ad
A