6t4n.1 | SWISS-MODEL Template Library

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SMTL ID : 6t4n.1

Human Carbonic anhydrase II bound by 2,4,6-trimethylbenzenesulfonamide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1:

6 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: F1A.2

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x F1A: 2,4,6-trimethylbenzenesulfonamide(Non-covalent)

F1A.2:

12 residues within 4Å:

Chain A: H.94, H.96, H.119, V.121, F.130, L.140, V.142, L.197, T.198, T.199, W.208
Ligands: ZN.1

8 PLIP interactions:

8 interactions with chain A

Hydrophobic interactions: A:V.121, A:F.130, A:L.140, A:V.142, A:L.197, A:T.199
Hydrogen bonds: A:T.198, A:T.198

1 x BCN: BICINE(Non-covalent)

BCN.3:

4 residues within 4Å:

Chain A: K.148, K.212, E.213, P.214

4 PLIP interactions:

4 interactions with chain A

Hydrogen bonds: A:K.148, A:K.148, A:K.212
Water bridges: A:Y.114

1 x MJB: 2-piperazin-1-ylethanol(Non-covalent)

MJB.4:

6 residues within 4Å:

Chain A: L.163, D.164, K.167, K.224, K.227, L.228

5 PLIP interactions:

5 interactions with chain A

Hydrogen bonds: A:L.163, A:K.224, A:K.224
Water bridges: A:D.164
Salt bridges: A:D.164

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.5:

4 residues within 4Å:

Chain A: Y.7, D.242, W.244, P.246

3 PLIP interactions:

3 interactions with chain A

Salt bridges: A:D.242
pi-Cation interactions: A:W.244, A:W.244

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Dudutiene, V. et al., Isoform-Selective Enzyme Inhibitors by Exploring Pocket Size According to the Lock-and-Key Principle. Biophys.J. (2020)

Release Date

2020-10-14

Peptides

carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

carbonic anhydrase 2

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Background

Transparent

Resolution

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