SMTL ID : 6tnk.1

CARBOXYPEPTIDASE T WITH N-SULFAMOYL-L-VALINE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.69, E.72, H.204, T.205 Ligands: NO5.2 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.69, A:E.72, A:E.72, A:H.204

1 x NO5: (2~{S})-3-methyl-2-(sulfamoylamino)butanoic acid(Non-covalent)

NO5.2: 13 residues within 4Å: Chain A: H.69, E.72, R.129, N.146, R.147, H.204, T.205, L.211, L.254, Y.255, T.275, E.277 Ligands: ZN.1 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.211, A:L.254, A:Y.255, A:T.275 Hydrogen bonds: A:R.129, A:R.129, A:N.146, A:Y.255, A:Y.255, A:E.277, A:E.277 Salt bridges: A:H.69, A:R.129, A:R.147

5 x CA: CALCIUM ION(Non-covalent)

CA.3: 6 residues within 4Å: Chain A: D.56, E.57, E.59, E.61, E.104, R.189 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.56, A:E.57, A:E.61, A:E.104, H2O.1, H2O.5 CA.4: 5 residues within 4Å: Chain A: S.50, D.51, E.57, E.59 Ligands: CA.5 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:S.50, A:D.51, A:E.57, A:E.59, H2O.4 CA.5: 5 residues within 4Å: Chain A: D.51, E.57, E.59, N.101 Ligands: CA.4 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.51, A:E.59, A:N.101, H2O.1, H2O.8 CA.6: 3 residues within 4Å: Chain A: S.7, Y.9, E.14 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:S.7, A:Y.9, A:E.14, H2O.8, H2O.9 CA.7: 3 residues within 4Å: Chain A: Y.5, D.291, E.292 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.291, A:E.292, H2O.5, H2O.9, H2O.10

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Timofeev, V.I. et al., CARBOXYPEPTIDASE T WITH N-SULFAMOYL-L-VALINE. To Be Published

Release Date

2019-12-18

Peptides

Carboxypeptidase T: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carboxypeptidase T

Related Entries With Identical Sequence