SMTL ID : 6tua.1

The RYK Pseudokinase Domain

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.38 Å

Oligo State

monomer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: Y.165, R.168, R.169 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.168, A:R.169 SO4.2: 4 residues within 4Å: Chain A: R.53, K.77, D.78, K.116 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.78, A:D.78 Salt bridges: A:R.53, A:K.116 SO4.3: 3 residues within 4Å: Chain A: R.101, Q.188, K.190 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.188, A:Q.188 Salt bridges: A:K.190 SO4.4: 2 residues within 4Å: Chain A: Y.165, R.169 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.165 Salt bridges: A:R.169 SO4.5: 2 residues within 4Å: Chain A: R.39, H.108 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.39, A:H.108

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sheetz, J.B. et al., Structural Insights into Pseudokinase Domains of Receptor Tyrosine Kinases. Mol.Cell (2020)

Release Date

2020-01-15

Peptides

Tyrosine-protein kinase RYK: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein kinase RYK