SMTL ID : 6u26.2 (1 other biounit)

PCSK9 in complex with compound 16

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.53 Å

Oligo State

monomer

Ligands

1 x 063: 4'-{[(1R)-6-{2-[2-({N~5~-[N,N'-bis(tert-butoxycarbonyl)carbamimidoyl]-N~2~-(tert-butoxycarbonyl)-L-ornithyl}amino)ethoxy]ethoxy}-1-methyl-1-{2-oxo-2-[(1,3-thiazol-2-yl)amino]ethyl}-1,2,3,4-tetrahydroisoquinolin-7-yl]oxy}-2'-fluoro[1,1'-biphenyl]-4-carboxylic acid(Non-covalent)

063.1: 23 residues within 4Å: Chain A: Y.263, C.293, A.298, S.299, A.300, P.301, V.303, T.305, R.327, C.328, V.329, D.330, R.382, R.428, V.430, W.431, A.433, I.444, A.445, R.446, C.447, A.448, K.476 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:Y.263, A:V.430, A:R.446 Hydrogen bonds: A:P.301, A:T.305, A:R.327, A:R.327, A:C.328, A:R.428, A:R.428 Water bridges: A:A.433 Salt bridges: A:R.446, A:K.476 Halogen bonds: A:I.444

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Petrilli, W.L. et al., From Screening to Targeted Degradation: Strategies for the Discovery and Optimization of Small Molecule Ligands for PCSK9. Cell Chem Biol (2020)

Release Date

2019-11-06

Peptides

Proprotein convertase subtilisin/kexin type 9: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Proprotein convertase subtilisin/kexin type 9

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