SMTL ID : 6u3z.1 (1 other biounit)

Structure of VD20_5A4 Fab

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

hetero-1-1-mer

Ligands

1 x PR: PRASEODYMIUM ION(Non-covalent)

PR.1: 3 residues within 4Å: Chain B: S.10, L.11, S.12 No protein-ligand interaction detected (PLIP)

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 10 residues within 4Å: Chain A: F.174, P.175, S.185, L.186, S.187 Chain B: Q.160, S.162, S.176, S.177, T.178 5 PLIP interactions: 3 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:Q.160, B:T.178, B:T.178, A:F.174, A:S.187

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Phad, G.E. et al., Extensive dissemination and intraclonal maturation of HIV Env vaccine-induced B cell responses. J.Exp.Med. (2020)

Release Date

2019-11-20

Peptides

V20_5A4 Heavy Chain: A
V20_5A4 Light Chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

V20_5A4 Heavy Chain

V20_5A4 Light Chain

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