SMTL ID : 6u5t.1 (2 other biounits)

Electron cryomicroscopy Structure of S. cerevisiae FAS in the Apo state

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-6-6-mer

Ligands

6 x PNS: 4'-PHOSPHOPANTETHEINE(Covalent)

PNS.1: 3 residues within 4Å: Chain A: S.180 Chain G: P.1419, A.1420 No protein-ligand interaction detected (PLIP) PNS.3: 3 residues within 4Å: Chain C: S.180 Chain K: P.1419, A.1420 No protein-ligand interaction detected (PLIP) PNS.5: 3 residues within 4Å: Chain E: S.180 Chain I: P.1419, A.1420 No protein-ligand interaction detected (PLIP) PNS.7: 3 residues within 4Å: Chain A: P.1419, A.1420 Chain G: S.180 No protein-ligand interaction detected (PLIP) PNS.9: 3 residues within 4Å: Chain E: P.1419, A.1420 Chain I: S.180 No protein-ligand interaction detected (PLIP) PNS.11: 3 residues within 4Å: Chain C: P.1419, A.1420 Chain K: S.180 No protein-ligand interaction detected (PLIP)

6 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)

FMN.2: 24 residues within 4Å: Chain B: P.595, G.596, M.597, T.598, P.599, N.650, I.652, G.682, A.683, K.706, T.733, R.736, G.737, G.738, G.739, G.768, S.769, G.770, G.802, S.803, M.806, L.1054, G.1056, A.1059 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:M.597, B:L.1054 Hydrogen bonds: B:T.598, B:N.650, B:A.683, B:K.706, B:K.706, B:T.733, B:G.738, B:S.769, B:G.770, B:G.802, B:S.803, B:S.803, B:S.803 FMN.4: 24 residues within 4Å: Chain D: P.595, G.596, M.597, T.598, P.599, N.650, I.652, G.682, A.683, K.706, T.733, R.736, G.737, G.738, G.739, G.768, S.769, G.770, G.802, S.803, M.806, L.1054, G.1056, A.1059 15 PLIP interactions: 15 interactions with chain D Hydrophobic interactions: D:M.597, D:L.1054 Hydrogen bonds: D:T.598, D:N.650, D:A.683, D:K.706, D:K.706, D:T.733, D:G.738, D:S.769, D:G.770, D:G.802, D:S.803, D:S.803, D:S.803 FMN.6: 24 residues within 4Å: Chain F: P.595, G.596, M.597, T.598, P.599, N.650, I.652, G.682, A.683, K.706, T.733, R.736, G.737, G.738, G.739, G.768, S.769, G.770, G.802, S.803, M.806, L.1054, G.1056, A.1059 15 PLIP interactions: 15 interactions with chain F Hydrophobic interactions: F:M.597, F:L.1054 Hydrogen bonds: F:T.598, F:N.650, F:A.683, F:K.706, F:K.706, F:T.733, F:G.738, F:S.769, F:G.770, F:G.802, F:S.803, F:S.803, F:S.803 FMN.8: 24 residues within 4Å: Chain H: P.595, G.596, M.597, T.598, P.599, N.650, I.652, G.682, A.683, K.706, T.733, R.736, G.737, G.738, G.739, G.768, S.769, G.770, G.802, S.803, M.806, L.1054, G.1056, A.1059 14 PLIP interactions: 14 interactions with chain H Hydrophobic interactions: H:M.597, H:L.1054 Hydrogen bonds: H:T.598, H:N.650, H:A.683, H:K.706, H:K.706, H:G.738, H:S.769, H:G.770, H:G.802, H:S.803, H:S.803, H:S.803 FMN.10: 24 residues within 4Å: Chain J: P.595, G.596, M.597, T.598, P.599, N.650, I.652, G.682, A.683, K.706, T.733, R.736, G.737, G.738, G.739, G.768, S.769, G.770, G.802, S.803, M.806, L.1054, G.1056, A.1059 14 PLIP interactions: 14 interactions with chain J Hydrophobic interactions: J:M.597, J:L.1054 Hydrogen bonds: J:T.598, J:N.650, J:A.683, J:K.706, J:K.706, J:G.738, J:S.769, J:G.770, J:G.802, J:S.803, J:S.803, J:S.803 FMN.12: 24 residues within 4Å: Chain L: P.595, G.596, M.597, T.598, P.599, N.650, I.652, G.682, A.683, K.706, T.733, R.736, G.737, G.738, G.739, G.768, S.769, G.770, G.802, S.803, M.806, L.1054, G.1056, A.1059 14 PLIP interactions: 14 interactions with chain L Hydrophobic interactions: L:M.597, L:L.1054 Hydrogen bonds: L:T.598, L:N.650, L:A.683, L:K.706, L:K.706, L:G.738, L:S.769, L:G.770, L:G.802, L:S.803, L:S.803, L:S.803

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lou, J.W. et al., Electron cryomicroscopy observation of acyl carrier protein translocation in type I fungal fatty acid synthase. Sci Rep (2019)

Release Date

2019-10-16

Peptides

Fatty acid synthase subunit alpha: ACEGIK
Fatty acid synthase subunit beta: BDFHJL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

E
A

G
A

I
A

K
A

B
G

D
G

F
G

H
G

J
G

L
G

Fatty acid synthase subunit alpha

Fatty acid synthase subunit beta

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