SMTL ID : 6v5t.1

Crystal structure of human prethrombin-2 with tryptophans replaced by 5-F-tryptophan

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: H.74, Y.78, W.81, L.127, W.179, W.258, E.260 No protein-ligand interaction detected (PLIP)

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: L.161, I.198, V.199, R.201, F.217 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.201 Salt bridges: A:R.201

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ruben, E.A. et al., 19F NMR reveals the conformational properties of free thrombin and its zymogen precursor prethrombin-2. J.Biol.Chem. (2020)

Release Date

2020-05-13

Peptides

Prothrombin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

Prothrombin