SMTL ID : 6v99.3 (4 other biounits)

Agrobacterium tumefaciens ADP-Glucose pyrophosphorylase- S72D in the presence of sulfate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.29 Å

Oligo State

homo-tetramer

Ligands

29 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: S.354, N.370, S.371, R.388 Ligand excluded by PLIP SO4.2: 3 residues within 4Å: Chain A: D.305, V.306, R.360 Ligand excluded by PLIP SO4.3: 2 residues within 4Å: Chain A: K.47, R.421 Ligand excluded by PLIP SO4.4: 6 residues within 4Å: Chain A: L.38, T.130, Y.229, F.253, G.254, K.255 Ligand excluded by PLIP SO4.5: 6 residues within 4Å: Chain A: W.287, R.288, D.289, V.290, G.291, A.295 Ligand excluded by PLIP SO4.6: 2 residues within 4Å: Chain A: R.80 Chain C: R.80 Ligand excluded by PLIP SO4.7: 2 residues within 4Å: Chain A: R.338, R.388 Ligand excluded by PLIP SO4.8: 7 residues within 4Å: Chain A: K.63, A.323, E.324, T.326 Chain B: E.324, I.325, T.326 Ligand excluded by PLIP SO4.9: 5 residues within 4Å: Chain B: S.354, N.370, S.371, R.388 Ligands: SO4.11 Ligand excluded by PLIP SO4.10: 2 residues within 4Å: Chain B: K.47, R.421 Ligand excluded by PLIP SO4.11: 3 residues within 4Å: Chain B: R.338, R.388 Ligands: SO4.9 Ligand excluded by PLIP SO4.12: 6 residues within 4Å: Chain B: L.38, T.130, Y.229, F.253, G.254, K.255 Ligand excluded by PLIP SO4.13: 5 residues within 4Å: Chain B: R.288, D.289, V.290, G.291, A.295 Ligand excluded by PLIP SO4.14: 4 residues within 4Å: Chain B: D.305, V.306, V.307, R.360 Ligand excluded by PLIP SO4.15: 5 residues within 4Å: Chain A: R.339, S.341 Chain B: R.339, S.341, V.343 Ligand excluded by PLIP SO4.16: 7 residues within 4Å: Chain B: R.52, D.398, H.399, V.401, T.431, Q.432, S.433 Ligand excluded by PLIP SO4.17: 7 residues within 4Å: Chain B: G.40, G.41, A.85, Q.87, G.129, T.130, A.133 Ligand excluded by PLIP SO4.18: 4 residues within 4Å: Chain C: S.354, N.370, S.371, R.388 Ligand excluded by PLIP SO4.19: 2 residues within 4Å: Chain C: K.47, R.421 Ligand excluded by PLIP SO4.20: 4 residues within 4Å: Chain C: T.130, Y.229, F.253, G.254 Ligand excluded by PLIP SO4.21: 2 residues within 4Å: Chain C: D.305, V.306 Ligand excluded by PLIP SO4.22: 5 residues within 4Å: Chain C: R.288, D.289, V.290, G.291, A.295 Ligand excluded by PLIP SO4.23: 2 residues within 4Å: Chain C: R.338, R.388 Ligand excluded by PLIP SO4.24: 5 residues within 4Å: Chain C: K.63, A.323, E.324 Chain D: I.325, T.326 Ligand excluded by PLIP SO4.25: 4 residues within 4Å: Chain D: S.354, N.370, S.371, R.388 Ligand excluded by PLIP SO4.26: 2 residues within 4Å: Chain D: K.47, R.421 Ligand excluded by PLIP SO4.27: 2 residues within 4Å: Chain D: R.338, R.388 Ligand excluded by PLIP SO4.28: 4 residues within 4Å: Chain D: D.305, V.306, V.307, R.360 Ligand excluded by PLIP SO4.29: 5 residues within 4Å: Chain D: R.288, D.289, V.290, G.291, A.295 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Alghamdi, M.A. et al., Site-directed mutagenesis of Serine-72 reveals the location of the fructose 6-phosphate regulatory site of the Agrobacterium tumefaciens ADP-glucose pyrophosphorylase. Protein Sci. (2022)

Release Date

2020-12-16

Peptides

Glucose-1-phosphate adenylyltransferase: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
O

B
P

C
G

D
H

Glucose-1-phosphate adenylyltransferase

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