SMTL ID : 6vxc.1 (7 other biounits)

Crystal structure of hydroxyproline dehydratase (HypD) from Clostridioides difficile

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 10 residues within 4Å: Chain A: F.172, W.297, D.298, S.354, F.360, G.453, C.454, E.456, Y.470, T.665 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.354, A:C.454, A:E.456, A:T.665 Water bridges: A:D.298, A:D.298

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Backman, L.R. et al., Molecular basis for catabolism of the abundant metabolitetrans-4-hydroxy-L-proline by a microbial glycyl radical enzyme. Elife (2020)

Release Date

2020-04-08

Peptides

Trans-4-hydroxy-L-proline dehydratase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Trans-4-hydroxy-L-proline dehydratase

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