SMTL ID : 6wnx.1 (2 other biounits)

FBXW11-SKP1 in complex with a pSer33/pSer37 Beta-Catenin peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-1-1-mer

Ligands

1 x LEU- ASP- SEP- GLY- ILE- HIS- SEP- GLY- ALA: Catenin beta-1(Non-covalent)

LEU-ASP-SEP-GLY-ILE-HIS-SEP-GLY-ALA.1: 20 residues within 4Å: Chain A: Y.131, R.145, S.169, L.171, S.185, L.211, K.225, A.251, A.252, N.254, G.268, R.291, G.292, A.294, S.308, L.332, R.334, Y.348, R.381, F.383 24 PLIP interactions: 24 interactions with chain A Hydrophobic interactions: A:A.252, A:A.294, A:L.332 Hydrogen bonds: A:Y.131, A:Y.131, A:S.169, A:S.185, A:S.185, A:N.254, A:N.254, A:G.268, A:G.292, A:S.308, A:R.334, A:Y.348, A:Y.348, A:R.381 Water bridges: A:S.169, A:R.270, A:R.270 Salt bridges: A:R.145, A:R.291, A:R.334 pi-Cation interactions: A:K.225

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: G.113, H.115, T.374, L.375, V.376, E.377 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.113, A:V.376, A:E.377, A:E.377 GOL.3: 3 residues within 4Å: Chain A: G.248, R.250, K.273 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.250, A:K.273 GOL.4: 4 residues within 4Å: Chain A: R.270, G.288, H.289, K.290 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.270, A:G.288, A:K.290, A:K.290 Water bridges: A:H.289 GOL.6: 2 residues within 4Å: Chain B: N.90, D.93 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.90, B:D.93

1 x NA: SODIUM ION(Non-functional Binders)

NA.5: 1 residues within 4Å: Chain A: K.273 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.273, A:K.273

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ivanochko, D. et al., FBXW11-SKP1 in complex with a pSer33/pSer37 Beta-Catenin peptide. To Be Published

Release Date

2020-05-06

Peptides

F-box/WD repeat-containing protein 11: A
S-phase kinase-associated protein 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

F-box/WD repeat-containing protein 11

S-phase kinase-associated protein 1

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