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SMTL ID : 6wq4.1

Carbonic Anhydrase II Complexed with 2-((2-Cyanoethyl)(phenethyl)amino)-N-phenethyl-N-(4-sulfamoylphenethyl)acetamide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

monomer

Ligands

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.1:

7 residues within 4Å:

Chain A: Y.7, G.12, P.13, D.242, W.244, R.245, P.246

4 PLIP interactions:

4 interactions with chain A

Hydrogen bonds: A:W.244, A:W.244
Water bridges: A:Y.7, A:D.242

1 x ZN: ZINC ION(Non-covalent)

ZN.2:

7 residues within 4Å:

Chain A: H.94, H.96, E.106, H.119, T.198
Ligands: U7A.3, GOL.4

3 PLIP interactions:

3 interactions with chain A

Metal complexes: A:H.94, A:H.96, A:H.119

1 x U7A: N~2~-(2-cyanoethyl)-N,N~2~-bis(2-phenylethyl)-N-[2-(4-sulfamoylphenyl)ethyl]glycinamide(Non-covalent)

U7A.3:

21 residues within 4Å:

Chain A: I.91, Q.92, H.94, H.96, E.106, H.119, V.121, D.129, F.130, G.131, V.134, V.142, L.197, T.198, T.199, P.200, P.201, L.203, W.208
Ligands: ZN.2, GOL.4

8 PLIP interactions:

8 interactions with chain A

Hydrophobic interactions: A:F.130, A:F.130, A:V.134, A:L.197, A:L.197, A:P.201
Hydrogen bonds: A:E.106, A:T.198

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.4:

11 residues within 4Å:

Chain A: W.5, N.62, H.64, A.65, N.67, Q.92, H.94, H.96, T.199
Ligands: ZN.2, U7A.3

4 PLIP interactions:

4 interactions with chain A

Hydrogen bonds: A:N.62, A:N.67, A:N.67, A:Q.92

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Bonardi, A. et al., Sulfonamide Inhibitors of Human Carbonic Anhydrases Designed through a Three-Tails Approach: Improving Ligand/Isoform Matching and Selectivity of Action. J.Med.Chem. (2020)

Release Date

2020-06-24

Peptides

Carbonic anhydrase 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Export Alignment

Secondary Structure
NoneDSSPPSIPREDSSpro

Colour Scheme

Fade MismatchesEnhance Mismatches

ChainUnique ChainRainbow2° StructureBfactorBfactor RangeSOAEntropyClustalHydrophobicSizeChargedPolarProlineSer/ThrCysteineAliphaticAromaticNo Colour

Background

3D Viewer
NGLPV2D

Carbonic anhydrase 2

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