SMTL ID : 6wqx.1 (1 other biounit)

Human PRPK-TPRKB complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.53 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.1: 22 residues within 4Å: Chain B: V.53, K.54, G.56, A.57, A.59, V.61, V.72, K.74, P.113, M.127, E.128, E.129, I.130, S.133, T.135, S.180, N.181, L.183, I.196, D.197 Ligands: MG.2, MG.3 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:E.128, B:I.130, B:S.180, B:D.197 Salt bridges: B:K.74

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain B: N.181, D.197 Ligands: ANP.1 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:D.197 MG.3: 4 residues within 4Å: Chain B: K.74, R.76, D.197 Ligands: ANP.1 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:D.197

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, J. et al., Crystal structure of the human PRPK-TPRKB complex. Commun Biol (2021)

Release Date

2021-02-17

Peptides

EKC/KEOPS complex subunit TPRKB: A
EKC/KEOPS complex subunit TP53RK: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

EKC/KEOPS complex subunit TPRKB

EKC/KEOPS complex subunit TP53RK

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