- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.05 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x SIN: SUCCINIC ACID(Non-covalent)
- 52 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.2: 7 residues within 4Å:- Chain A: R.140, E.470, H.471, T.473, I.475
- Chain D: T.467, H.471
Ligand excluded by PLIPEDO.3: 4 residues within 4Å:- Chain A: Y.154, Q.157, W.161, V.284
Ligand excluded by PLIPEDO.4: 3 residues within 4Å:- Chain A: R.82, E.190, E.194
Ligand excluded by PLIPEDO.5: 8 residues within 4Å:- Chain A: I.149, K.176, G.209, G.212, A.213, F.226, T.232, V.236
Ligand excluded by PLIPEDO.6: 4 residues within 4Å:- Chain A: T.275, F.279, G.444
- Chain D: V.488
Ligand excluded by PLIPEDO.7: 3 residues within 4Å:- Chain A: R.58, E.59, A.62
Ligand excluded by PLIPEDO.8: 2 residues within 4Å:- Chain A: S.2, L.34
Ligand excluded by PLIPEDO.9: 5 residues within 4Å:- Chain A: L.79, R.80, N.83, I.106, V.107
Ligand excluded by PLIPEDO.10: 4 residues within 4Å:- Chain A: D.47, V.50, A.51, H.218
Ligand excluded by PLIPEDO.11: 5 residues within 4Å:- Chain A: D.262, Q.294, Q.295, A.296, E.398
Ligand excluded by PLIPEDO.12: 5 residues within 4Å:- Chain A: D.267, R.304, A.307, R.308, R.311
Ligand excluded by PLIPEDO.13: 3 residues within 4Å:- Chain A: L.337, D.341, G.354
Ligand excluded by PLIPEDO.14: 5 residues within 4Å:- Chain A: P.219, G.220, A.222, R.474
- Chain D: K.456
Ligand excluded by PLIPEDO.17: 7 residues within 4Å:- Chain B: R.140, E.470, H.471, T.473, I.475
- Chain C: T.467, H.471
Ligand excluded by PLIPEDO.18: 4 residues within 4Å:- Chain B: Y.154, Q.157, W.161, V.284
Ligand excluded by PLIPEDO.19: 3 residues within 4Å:- Chain B: R.82, E.190, E.194
Ligand excluded by PLIPEDO.20: 8 residues within 4Å:- Chain B: I.149, K.176, G.209, G.212, A.213, F.226, T.232, V.236
Ligand excluded by PLIPEDO.21: 4 residues within 4Å:- Chain B: T.275, F.279, G.444
- Chain C: V.488
Ligand excluded by PLIPEDO.22: 3 residues within 4Å:- Chain B: R.58, E.59, A.62
Ligand excluded by PLIPEDO.23: 2 residues within 4Å:- Chain B: S.2, L.34
Ligand excluded by PLIPEDO.24: 5 residues within 4Å:- Chain B: L.79, R.80, N.83, I.106, V.107
Ligand excluded by PLIPEDO.25: 4 residues within 4Å:- Chain B: D.47, V.50, A.51, H.218
Ligand excluded by PLIPEDO.26: 5 residues within 4Å:- Chain B: D.262, Q.294, Q.295, A.296, E.398
Ligand excluded by PLIPEDO.27: 5 residues within 4Å:- Chain B: D.267, R.304, A.307, R.308, R.311
Ligand excluded by PLIPEDO.28: 3 residues within 4Å:- Chain B: L.337, D.341, G.354
Ligand excluded by PLIPEDO.29: 5 residues within 4Å:- Chain B: P.219, G.220, A.222, R.474
- Chain C: K.456
Ligand excluded by PLIPEDO.32: 7 residues within 4Å:- Chain B: T.467, H.471
- Chain C: R.140, E.470, H.471, T.473, I.475
Ligand excluded by PLIPEDO.33: 4 residues within 4Å:- Chain C: Y.154, Q.157, W.161, V.284
Ligand excluded by PLIPEDO.34: 3 residues within 4Å:- Chain C: R.82, E.190, E.194
Ligand excluded by PLIPEDO.35: 8 residues within 4Å:- Chain C: I.149, K.176, G.209, G.212, A.213, F.226, T.232, V.236
Ligand excluded by PLIPEDO.36: 4 residues within 4Å:- Chain B: V.488
- Chain C: T.275, F.279, G.444
Ligand excluded by PLIPEDO.37: 3 residues within 4Å:- Chain C: R.58, E.59, A.62
Ligand excluded by PLIPEDO.38: 2 residues within 4Å:- Chain C: S.2, L.34
Ligand excluded by PLIPEDO.39: 5 residues within 4Å:- Chain C: L.79, R.80, N.83, I.106, V.107
Ligand excluded by PLIPEDO.40: 4 residues within 4Å:- Chain C: D.47, V.50, A.51, H.218
Ligand excluded by PLIPEDO.41: 5 residues within 4Å:- Chain C: D.262, Q.294, Q.295, A.296, E.398
Ligand excluded by PLIPEDO.42: 5 residues within 4Å:- Chain C: D.267, R.304, A.307, R.308, R.311
Ligand excluded by PLIPEDO.43: 3 residues within 4Å:- Chain C: L.337, D.341, G.354
Ligand excluded by PLIPEDO.44: 5 residues within 4Å:- Chain B: K.456
- Chain C: P.219, G.220, A.222, R.474
Ligand excluded by PLIPEDO.47: 7 residues within 4Å:- Chain A: T.467, H.471
- Chain D: R.140, E.470, H.471, T.473, I.475
Ligand excluded by PLIPEDO.48: 4 residues within 4Å:- Chain D: Y.154, Q.157, W.161, V.284
Ligand excluded by PLIPEDO.49: 3 residues within 4Å:- Chain D: R.82, E.190, E.194
Ligand excluded by PLIPEDO.50: 8 residues within 4Å:- Chain D: I.149, K.176, G.209, G.212, A.213, F.226, T.232, V.236
Ligand excluded by PLIPEDO.51: 4 residues within 4Å:- Chain A: V.488
- Chain D: T.275, F.279, G.444
Ligand excluded by PLIPEDO.52: 3 residues within 4Å:- Chain D: R.58, E.59, A.62
Ligand excluded by PLIPEDO.53: 2 residues within 4Å:- Chain D: S.2, L.34
Ligand excluded by PLIPEDO.54: 5 residues within 4Å:- Chain D: L.79, R.80, N.83, I.106, V.107
Ligand excluded by PLIPEDO.55: 4 residues within 4Å:- Chain D: D.47, V.50, A.51, H.218
Ligand excluded by PLIPEDO.56: 5 residues within 4Å:- Chain D: D.262, Q.294, Q.295, A.296, E.398
Ligand excluded by PLIPEDO.57: 5 residues within 4Å:- Chain D: D.267, R.304, A.307, R.308, R.311
Ligand excluded by PLIPEDO.58: 3 residues within 4Å:- Chain D: L.337, D.341, G.354
Ligand excluded by PLIPEDO.59: 5 residues within 4Å:- Chain A: K.456
- Chain D: P.219, G.220, A.222, R.474
Ligand excluded by PLIP- 4 x NA: SODIUM ION(Non-functional Binders)
NA.15: 4 residues within 4Å:- Chain A: T.26, F.27, D.93, V.180
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:T.26, A:F.27, A:D.93, A:D.93
NA.30: 4 residues within 4Å:- Chain B: T.26, F.27, D.93, V.180
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:T.26, B:F.27, B:D.93, B:D.93
NA.45: 4 residues within 4Å:- Chain C: T.26, F.27, D.93, V.180
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:F.27, C:V.180
NA.60: 4 residues within 4Å:- Chain D: T.26, F.27, D.93, V.180
2 PLIP interactions:2 interactions with chain D- Hydrogen bonds: D:F.27, D:D.93
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Beard, D.K. et al., Crystal structure of betaine aldehyde dehydrogenase from Burkholderia pseudomallei. Acta Crystallogr.,Sect.F (2022)
- Release Date
- 2020-05-20
- Peptides
- NAD/NADP-dependent betaine aldehyde dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.05 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x SIN: SUCCINIC ACID(Non-covalent)
- 52 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 4 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Beard, D.K. et al., Crystal structure of betaine aldehyde dehydrogenase from Burkholderia pseudomallei. Acta Crystallogr.,Sect.F (2022)
- Release Date
- 2020-05-20
- Peptides
- NAD/NADP-dependent betaine aldehyde dehydrogenase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A