SMTL ID : 6wzq.2 (1 other biounit)

Structure of SARS-CoV-2 Nucleocapsid dimerization domain, P21 form

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

homo-dimer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: R.32, R.35 5 PLIP interactions: 5 interactions with chain A Water bridges: A:R.32, A:R.35, A:Q.45 Salt bridges: A:R.32, A:R.35 SO4.2: 3 residues within 4Å: Chain A: K.39, R.66, Q.67 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Q.67 Water bridges: A:R.66, A:R.66, A:Q.67 Salt bridges: A:K.39, A:R.66 SO4.3: 1 residues within 4Å: Chain B: R.35 3 PLIP interactions: 3 interactions with chain B Water bridges: B:R.35, B:R.35 Salt bridges: B:R.35

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ye, Q. et al., Architecture and self-assembly of the SARS-CoV-2 nucleocapsid protein. Protein Sci. (2020)

Release Date

2020-05-27

Peptides

Nucleoprotein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Nucleoprotein

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