- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.65 Å
- Oligo State
- homo-dimer
- Ligands
- 12 x CL: CHLORIDE ION(Non-functional Binders)
- 5 x FMT: FORMIC ACID(Non-functional Binders)
FMT.7: 4 residues within 4Å:- Chain A: Q.286, R.293, E.353, P.354
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Q.286
- Water bridges: A:Q.286
FMT.8: 4 residues within 4Å:- Chain A: A.26, S.123, F.124, C.125
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:S.123
- Water bridges: A:C.125
FMT.9: 5 residues within 4Å:- Chain A: C.27, A.28, V.91, P.266, R.267
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:C.27
FMT.16: 5 residues within 4Å:- Chain B: G.38, R.40, D.110, A.111, V.113
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:A.111
- Water bridges: B:V.113
FMT.17: 6 residues within 4Å:- Chain B: T.33, P.35, Y.264, E.272, F.273, I.274
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:I.274
- 3 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
TRS.10: 6 residues within 4Å:- Chain A: L.31, T.33, R.270, E.272, R.297, E.353
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:T.33, A:R.270, A:R.270, A:E.272
- Water bridges: A:T.33
TRS.19: 6 residues within 4Å:- Chain B: L.31, T.33, R.270, E.272, R.297, E.353
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:T.33, B:R.270, B:R.270, B:E.272, B:E.353
- Water bridges: B:T.33, B:E.272, B:E.272
TRS.21: 6 residues within 4Å:- Chain A: H.136
- Chain C: T.12, G.13, G.14
- Chain D: C.8, C.9
No protein-ligand interaction detected (PLIP)- 1 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Freire-Rios, A. et al., Architecture of DNA elements mediating ARF transcription factor binding and auxin-responsive gene expression in Arabidopsis . Proc.Natl.Acad.Sci.USA (2020)
- Release Date
- 2020-09-09
- Peptides
- Auxin response factor 1: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.65 Å
- Oligo State
- homo-dimer
- Ligands
- 12 x CL: CHLORIDE ION(Non-functional Binders)
- 5 x FMT: FORMIC ACID(Non-functional Binders)
- 3 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)
- 1 x NA: SODIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Freire-Rios, A. et al., Architecture of DNA elements mediating ARF transcription factor binding and auxin-responsive gene expression in Arabidopsis . Proc.Natl.Acad.Sci.USA (2020)
- Release Date
- 2020-09-09
- Peptides
- Auxin response factor 1: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B