SMTL ID : 6zfb.1

Structure of the B. subtilis RNA POLYMERASE in complex with HelD (dimer)

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-4-2-2-2-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain F: C.818, C.892, V.898, C.899, C.902 3 PLIP interactions: 3 interactions with chain F Metal complexes: F:C.818, F:C.899, F:C.902 ZN.2: 5 residues within 4Å: Chain M: C.818, C.892, V.898, C.899, C.902 3 PLIP interactions: 3 interactions with chain M Metal complexes: M:C.818, M:C.899, M:C.902

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pei, H.H. et al., The delta subunit and NTPase HelD institute a two-pronged mechanism for RNA polymerase recycling. Nat Commun (2020)

Release Date

2020-10-14

Peptides

DNA-directed RNA polymerase subunit delta: AH
RNA polymerase subunit omega: BI
DNA-directed RNA polymerase subunit alpha: CDJK
DNA-directed RNA polymerase subunit beta: EL
DNA-directed RNA polymerase subunit beta': FM
DNA helicase: GN

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

H
d

B
E

I
e

C
U

D
V

J
u

K
v

E
X

L
x

F
Y

M
y

G
H

N
h

DNA-directed RNA polymerase subunit delta

RNA polymerase subunit omega

DNA-directed RNA polymerase subunit alpha

DNA-directed RNA polymerase subunit beta

DNA-directed RNA polymerase subunit beta'

DNA helicase

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