SMTL ID : 6zzl.1

Crystal structure of the catalytic domain plus N-terminal linker of the acetyltransferase AceF (E2p) from Corynebacterium glutamicum.

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.23 Å

Oligo State

homo-trimer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 7 residues within 4Å: Chain A: A.172, V.173, D.174, T.224, N.225, S.228 Chain B: A.286 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:A.172, A:D.174, A:N.225, B:A.286 GOL.3: 6 residues within 4Å: Chain B: A.172, V.173, D.174, T.224, N.225, S.228 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:A.172, B:D.174, B:T.224, B:N.225

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 3 residues within 4Å: Chain A: T.235 Chain B: T.235 Chain C: T.235 8 PLIP interactions: 3 interactions with chain B, 2 interactions with chain A, 3 interactions with chain C Water bridges: B:Q.99, B:T.101, B:T.235, C:T.101, C:T.235 Hydrogen bonds: A:Q.99, A:T.235, C:Q.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bruch, E.M. et al., Actinobacteria challenge the paradigm: A unique protein architecture for a well-known, central metabolic complex. Proc.Natl.Acad.Sci.USA (2021)

Release Date

2021-08-18

Peptides

Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex