SMTL ID : 7abv.1

Structure of the S1-cleaved mouse Notch1 Negative Regulatory Region (NRR)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.07 Å

Oligo State

monomer

Ligands

3 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: H.96, D.99, H.101, D.103, D.114, D.117 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:H.96, A:H.101, A:D.103, A:D.114, A:D.117 CA.2: 6 residues within 4Å: Chain A: Y.56, D.59, H.61, D.63, D.74, D.77 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:Y.56, A:D.59, A:H.61, A:D.63, A:D.77 CA.3: 6 residues within 4Å: Chain A: D.14, N.17, V.19, N.21, D.32, D.35 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.14, A:V.19, A:D.32, A:D.35

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.4: 6 residues within 4Å: Chain A: K.45, N.46, S.242, T.244, D.245, A.248 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:T.244, A:A.248 Hydrogen bonds: A:S.242, A:D.245, A:D.245 Water bridges: A:N.46 NAG.5: 1 residues within 4Å: Chain A: N.144 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.144

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zeronian, M.R. et al., Notch-Jagged signaling complex defined by an interaction mosaic. Proc.Natl.Acad.Sci.USA (2021)

Release Date

2021-07-07

Peptides

Neurogenic locus notch homolog protein 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Neurogenic locus notch homolog protein 1