SMTL ID : 7ax7.1

Crystal structure of the Xyl-CE4 domain of a multidomain xylanase from the hindgut metagenome of Trinervitermes trinervoides

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x CO: COBALT (II) ION(Non-covalent)

CO.1: 4 residues within 4Å: Chain A: D.12, H.62, H.66 Ligands: ACT.2 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Ligand interactions Metal complexes: A:D.12, A:H.62, A:H.66, ACT.2

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 9 residues within 4Å: Chain A: D.11, D.12, H.62, H.66, P.102, Y.103, I.104, H.153 Ligands: CO.1 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.104 Hydrogen bonds: A:D.11, A:Y.103 Salt bridges: A:H.62, A:H.66, A:H.153

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Anye, V. et al., Structural and biophysical characterization of the multidomain xylanase Xyl. Plos One (2022)

Release Date

2020-11-18

Peptides

Endo-1,4-beta-xylanase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Endo-1,4-beta-xylanase