SMTL ID : 7bq7.1

Crystal structure of 2019-nCoV nsp16-nsp10 complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.37 Å

Oligo State

hetero-1-1-mer

Ligands

1 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.1: 17 residues within 4Å: Chain A: N.43, Y.47, G.71, A.72, G.73, S.74, P.80, G.81, D.99, L.100, N.101, D.114, C.115, D.130, M.131, Y.132, F.149 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:N.43, A:G.71, A:G.73, A:G.81, A:L.100, A:N.101, A:D.114, A:C.115, A:Y.132 Water bridges: A:G.71 Salt bridges: A:D.130

2 x ZN: ZINC ION(Non-covalent)

ZN.2: 5 residues within 4Å: Chain B: C.117, C.120, C.128, S.129, C.130 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:C.117, B:C.130 ZN.3: 4 residues within 4Å: Chain B: C.74, C.77, H.83, C.90 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:H.83, B:C.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yan, L.M. et al., Crystal structure of 2019-nCoV nsp16-nsp10 complex. To Be Published

Release Date

2020-06-17

Peptides

2'-O-methyltransferase: A
Non-structural protein 10: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

2'-O-methyltransferase

Non-structural protein 10

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