SMTL ID : 7ccv.1

Crystal structure of death-associated protein kinase 1 in complex with piceatannol

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x PIT: PICEATANNOL(Non-covalent)

PIT.1: 15 residues within 4Å: Chain A: L.19, V.27, A.40, K.42, E.64, L.68, I.77, L.93, E.94, L.95, V.96, M.146, I.160, D.161, F.162 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:L.19, A:V.27, A:A.40, A:K.42, A:L.68, A:I.77, A:L.93, A:L.93, A:I.160, A:I.160, A:F.162 Hydrogen bonds: A:K.42, A:K.42, A:E.64, A:V.96, A:V.96, A:D.161, A:F.162 Water bridges: A:L.19

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: F.236, K.249, R.253 3 PLIP interactions: 3 interactions with chain A Water bridges: A:F.236 Salt bridges: A:K.249, A:R.253

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yokoyama, T. et al., Crystal structure of death-associated protein kinase 1 in complex with the dietary compound resveratrol. Iucrj (2020)

Release Date

2021-01-20

Peptides

Death-associated protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Death-associated protein kinase 1

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