SMTL ID : 7cnz.1 (1 other biounit)

Crystal structure of 10PE bound PSD from E. coli (2.70 A)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-2-2-mer

Ligands

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 2 residues within 4Å: Chain A: R.145, R.249 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.145, A:R.249 PO4.3: 2 residues within 4Å: Chain C: R.145, R.249 2 PLIP interactions: 2 interactions with chain C Salt bridges: C:R.145, C:R.249

2 x PEX: 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE(Covalent)

PEX.2: 19 residues within 4Å: Chain A: A.22, G.25, A.26, F.41, Y.45, F.63, Y.137, L.138, H.144, S.166, V.167, N.168, A.203, T.204, I.205, V.206, L.252 Chain B: X.1, T.2 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:A.26, A:F.41, A:F.63, A:L.252 Hydrogen bonds: A:L.138, A:S.166, A:V.167, A:N.168 PEX.4: 18 residues within 4Å: Chain C: A.22, G.25, A.26, V.37, F.41, Y.45, Y.137, L.138, H.144, S.166, V.167, N.168, A.203, T.204, I.205, V.206 Chain D: X.1, T.2 7 PLIP interactions: 7 interactions with chain C Hydrophobic interactions: C:V.37, C:F.41 Hydrogen bonds: C:Y.137, C:L.138, C:S.166, C:V.167, C:N.168

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cho, G. et al., Structural insights into phosphatidylethanolamine formation in bacterial membrane biogenesis. Sci Rep (2021)

Release Date

2021-03-24

Peptides

Phosphatidylserine decarboxylase beta chain: AC
Phosphatidylserine decarboxylase alpha chain: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

Phosphatidylserine decarboxylase beta chain

Phosphatidylserine decarboxylase alpha chain

Related Entries With Identical Sequence