SMTL ID : 7cyw.1

Crystal structure of a flavonoid C-glucosyltrasferase from Fagopyrum esculentum (FeCGTa) complexed with BrUTP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 4 residues within 4Å: Chain A: E.210, P.211, E.212, T.213 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.212, A:E.212, A:E.212, A:T.213 Water bridges: A:T.213

1 x BUP: 5-bromouridine 5'-(tetrahydrogen triphosphate)(Non-covalent)

BUP.2: 16 residues within 4Å: Chain A: M.16, G.17, T.20, S.262, G.264, N.265, V.291, W.326, V.327, Q.329, H.344, G.346, W.347, N.348, S.349, E.352 20 PLIP interactions: 20 interactions with chain A Hydrogen bonds: A:N.265, A:N.265, A:V.327, A:V.327, A:Q.329, A:W.347, A:N.348, A:N.348, A:S.349, A:S.349, A:E.352, A:E.352 Water bridges: A:R.266, A:T.330, A:Q.369, A:Q.369, A:Q.369 Salt bridges: A:H.344, A:H.344 pi-Stacking: A:W.326

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Koyanagi, Y. et al., Crystal structure of a flavonoid C-glucosyltrasferase from Fagopyrum esculentum. To be published

Release Date

2020-09-23

Peptides

UDP-glycosyltransferase 708C1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UDP-glycosyltransferase 708C1