SMTL ID : 7lc4.1

Crystal structure of Pseudomonas aeruginosa PBP3 in complex with gamma-lactam YU253911

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x XVG: 1-[(2S)-2-{[(2Z)-2-(2-amino-5-chloro-1,3-thiazol-4-yl)-2-{[(2-carboxypropan-2-yl)oxy]imino}acetyl]amino}-3-oxopropyl]-4-{[2-(5,6-dihydroxy-1,3-dioxo-1,3-dihydro-2H-isoindol-2-yl)ethyl]carbamoyl}-2,5-dihydro-1H-pyrazole-3-carboxylic acid(Covalent)

XVG.1: 18 residues within 4Å: Chain A: E.250, G.252, S.253, V.292, S.293, S.308, N.310, Y.366, Y.368, K.443, S.444, G.445, T.446, A.447, R.448, Y.462, F.492, G.493 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:V.292, A:T.446 Hydrogen bonds: A:E.250, A:S.253, A:S.308, A:S.308, A:N.310, A:T.446, A:T.446, A:T.446, A:T.446, A:R.448, A:G.493 Water bridges: A:V.292, A:V.292, A:K.443, A:S.444, A:S.444 Salt bridges: A:K.443, A:R.448 Halogen bonds: A:Y.366

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Goldberg, J.A. et al., A gamma-lactam siderophore antibiotic effective against multidrug-resistant Pseudomonas aeruginosa, Klebsiella pneumoniae, and Acinetobacter spp. Eur.J.Med.Chem. (2021)

Release Date

2021-04-28

Peptides

Peptidoglycan D,D-transpeptidase FtsI: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidoglycan D,D-transpeptidase FtsI

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