SMTL ID : 7n3m.1

Co-complex CYP46A1 with 0431 (compound 17)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 26 residues within 4Å: Chain A: K.84, Y.89, L.105, V.106, W.114, R.118, F.125, F.279, A.282, G.283, T.286, S.287, H.290, A.347, T.350, P.409, F.410, S.411, R.415, S.416, C.417, I.418, G.419, F.422, A.423 Ligands: 05D.2 21 PLIP interactions: 21 interactions with chain A, Hydrophobic interactions: A:L.105, A:V.106, A:F.125, A:F.279, A:F.279, A:A.282, A:H.290, A:F.410, A:I.418, A:F.422 Hydrogen bonds: A:Y.89, A:T.350 Water bridges: A:K.84, A:R.352, A:S.411, A:R.415 Salt bridges: A:K.84, A:K.84, A:R.118, A:R.415 Metal complexes: A:C.417

1 x 05D: N,N-dimethyl-1-[4-(4-methyl-1H-pyrazol-1-yl)pyridin-3-yl]piperidine-4-carboxamide(Non-covalent)

05D.2: 16 residues within 4Å: Chain A: F.60, M.88, Y.89, L.92, F.101, V.106, I.202, R.206, I.281, A.282, E.285, T.286, G.349, A.454, T.455 Ligands: HEM.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.101, A:V.106, A:I.202, A:A.282, A:T.286 Hydrogen bonds: A:R.206, A:R.206

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kajita, Y. et al., Discovery of Novel 3-Piperidinyl Pyridine Derivatives as Highly Potent and Selective Cholesterol 24-Hydroxylase (CH24H) Inhibitors. J.Med.Chem. (2022)

Release Date

2022-02-23

Peptides

Cholesterol 24-hydroxylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
AAA

Cholesterol 24-hydroxylase

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