SMTL ID : 7nd7.1

EM structure of SARS-CoV-2 Spike glycoprotein in complex with COVOX-316 Fab

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-3-3-3-mer
Ligands
15 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
3 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
25 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Dejnirattisai, W. et al., The antigenic anatomy of SARS-CoV-2 receptor binding domain. Cell (2021)
Release Date
2021-03-03
Peptides
Spike glycoprotein: ABC
COVOX-316 Fab heavy chain: DFH
COVOX-316 Fab light chain: EGI
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
H
F
F
H
J
E
L
G
G
I
K

Spike glycoprotein

Toggle Identical (ABC)

COVOX-316 Fab heavy chain

Toggle Identical (DFH)

COVOX-316 Fab light chain

Toggle Identical (EGI)

Related Entries With Identical Sequence

6z43.1 | 6z97.1 | 6zdh.1 | 6zhd.1 | 7nd3.1 | 7nd4.1 | 7nd5.1 | 7nd6.1 | 7nd8.1 | 7nd9.1 | 7nda.1 | 7ndb.1 | 7ndc.1 | 7ndd.1