SMTL ID : 7nn1.2 (1 other biounit)

Crystal structure of Mycobacterium tuberculosis ArgD with prosthetic group pyridoxal 5'-phosphate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.54 Å

Oligo State

homo-dimer

Ligands

2 x NO3: NITRATE ION(Non-functional Binders)

NO3.1: 6 residues within 4Å: Chain A: I.55, F.141, E.198, Q.229, K.255, R.372 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.229, A:R.372, A:R.372 Water bridges: A:E.198 NO3.2: 7 residues within 4Å: Chain A: K.124, G.279, L.280 Chain B: R.144, L.149, K.157, F.161 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:K.124, A:K.124, A:G.279, B:R.144

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gupta, P. et al., A fragment-based approach to assess the ligandability of ArgB, ArgC, ArgD and ArgF in the L-arginine biosynthetic pathway of Mycobacterium tuberculosis. Comput Struct Biotechnol J (2021)

Release Date

2021-06-30

Peptides

Acetylornithine aminotransferase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Acetylornithine aminotransferase

Related Entries With Identical Sequence