SMTL ID : 7osq.1

Crystal structure of UDP-N-acetylenolpyruvoylglucosamine reductase (MurB) from Pseudomonas aeruginosa in complex with FAD and a pyrazole derivative (fragment 18)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.07 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 34 residues within 4Å: Chain A: T.16, V.51, I.52, G.53, G.54, G.55, S.56, N.57, L.58, M.71, I.117, P.118, G.119, T.120, A.123, M.126, Q.127, I.129, G.130, A.131, R.166, W.177, L.178, I.179, R.224, P.229, P.231, N.236, A.237, G.238, E.335, N.337, Y.339 Ligands: 0JI.2 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:P.118 Hydrogen bonds: A:V.51, A:G.53, A:G.54, A:G.55, A:S.56, A:N.57, A:T.120, A:Q.127, A:G.130, A:G.130, A:R.166, A:I.179, A:I.179, A:R.224, A:R.224, A:N.337 Water bridges: A:T.120, A:A.123, A:S.239, A:E.335

1 x 0JI: 5-methyl-1-phenyl-1,2,3-triazole-4-carboxylic acid(Non-covalent)

0JI.2: 9 residues within 4Å: Chain A: G.130, A.131, Y.132, R.166, L.228, G.238, S.239, V.301 Ligands: FAD.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.228, A:L.228, A:V.301 Hydrogen bonds: A:Y.132, A:R.166 Water bridges: A:G.133, A:S.239

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Acebron-Garcia-de-Eulate, M. et al., Discovery of Novel Inhibitors of Uridine Diphosphate- N -Acetylenolpyruvylglucosamine Reductase (MurB) from Pseudomonas aeruginosa , an Opportunistic Infectious Agent Causing Death in Cystic Fibrosis Patients. J.Med.Chem. (2022)

Release Date

2021-11-03

Peptides

UDP-N-acetylenolpyruvoylglucosamine reductase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

UDP-N-acetylenolpyruvoylglucosamine reductase