- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- monomer
- Ligands
- 8 x MYR: MYRISTIC ACID(Non-covalent)
MYR.1: 11 residues within 4Å:- Chain A: R.141, L.159, Y.162, L.163, I.166, L.178, A.182, Y.185, L.206, R.210
- Ligands: MYR.8
11 PLIP interactions:11 interactions with chain A- Hydrophobic interactions: A:Y.162, A:Y.162, A:Y.162, A:I.166, A:A.182, A:Y.185, A:Y.185, A:Y.185
- Water bridges: A:R.210
- Salt bridges: A:R.141, A:R.210
MYR.2: 12 residues within 4Å:- Chain A: R.34, L.38, L.46, Y.174, P.176, L.275, A.278, R.281, A.282, L.307, L.308, S.311
12 PLIP interactions:12 interactions with chain A- Hydrophobic interactions: A:L.38, A:L.46, A:P.176, A:L.275, A:A.278, A:L.308
- Hydrogen bonds: A:Y.174, A:S.311, A:S.311
- Water bridges: A:R.281, A:H.312
- Salt bridges: A:R.281
MYR.3: 13 residues within 4Å:- Chain A: S.366, V.368, R.372, L.411, I.412, N.415, F.427, V.457, E.474, L.477, R.509
- Ligands: MYR.4, EDO.9
11 PLIP interactions:11 interactions with chain A- Hydrophobic interactions: A:V.368, A:L.411, A:N.415, A:F.427, A:V.457, A:E.474
- Hydrogen bonds: A:S.366
- Water bridges: A:V.506, A:R.509
- Salt bridges: A:R.372, A:R.509
MYR.4: 9 residues within 4Å:- Chain A: L.411, N.415, R.434, Y.435, L.477, L.484, F.512, S.513
- Ligands: MYR.3
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:Y.435, A:Y.435, A:Y.435, A:L.477, A:L.484, A:F.512
- Salt bridges: A:K.438
MYR.5: 11 residues within 4Å:- Chain A: Y.425, N.429, F.531, K.549, A.552, L.553, L.556, V.571, M.572, F.575, S.603
9 PLIP interactions:9 interactions with chain A- Hydrophobic interactions: A:F.531, A:F.531, A:A.552, A:L.556, A:V.571, A:F.575, A:F.575
- Hydrogen bonds: A:M.572
- Salt bridges: A:K.549
MYR.6: 9 residues within 4Å:- Chain A: R.233, A.234, K.236, A.237, V.240, D.348, L.351, A.374, V.506
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:K.236, A:V.240, A:L.351, A:L.351, A:A.374
- Water bridges: A:S.504, A:S.504
MYR.7: 11 residues within 4Å:- Chain A: K.223, W.238, L.243, R.246, H.266, R.281, L.284, I.288, S.311, I.314, A.315
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:L.243, A:I.288
- Salt bridges: A:K.223, A:H.266
MYR.8: 11 residues within 4Å:- Chain A: I.166, R.169, H.170, F.173, L.178, Y.185, L.209, R.210, G.213, S.217
- Ligands: MYR.1
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:I.166, A:F.173, A:F.173
- Water bridges: A:L.139, A:L.139
- Salt bridges: A:H.170
- 1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.9: 5 residues within 4Å:- Chain A: V.368, E.474, S.478, L.481
- Ligands: MYR.3
2 PLIP interactions:2 interactions with chain A- Water bridges: A:E.474, A:S.478
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pomyalov, S. et al., Structural and mechanistic insights for the binding of aristolochic acids and their active metabolites to human serum albumin. To be published
- Release Date
- 2022-06-22
- Peptides
- Serum albumin: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- monomer
- Ligands
- 8 x MYR: MYRISTIC ACID(Non-covalent)
- 1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pomyalov, S. et al., Structural and mechanistic insights for the binding of aristolochic acids and their active metabolites to human serum albumin. To be published
- Release Date
- 2022-06-22
- Peptides
- Serum albumin: A
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
B