- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.33 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x 8YX: 2-azanyl-4,6-bis(bromanyl)phenol(Non-covalent)
- 4 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
FMN.2: 25 residues within 4Å:- Chain A: S.43, M.44, Y.45, G.46, H.47, I.48, E.49, P.110, T.111, R.112, F.113, G.114, S.146, T.147, G.148, T.149, G.150, G.151, G.152, A.199
- Chain C: Y.176
- Chain D: D.125, G.128, H.166
- Ligands: 8YX.9
19 PLIP interactions:19 interactions with chain A- Hydrophobic interactions: A:F.113
- Hydrogen bonds: A:S.43, A:M.44, A:Y.45, A:G.46, A:H.47, A:I.48, A:T.111, A:R.112, A:F.113, A:G.114, A:S.146, A:S.146, A:S.146, A:G.148, A:T.149, A:G.150, A:G.151
- Salt bridges: A:H.47
FMN.5: 25 residues within 4Å:- Chain B: S.43, M.44, Y.45, G.46, H.47, I.48, E.49, P.110, T.111, R.112, F.113, G.114, S.146, T.147, G.148, T.149, G.150, G.151, G.152, A.199
- Chain C: D.125, G.128, H.166
- Chain D: Y.176
- Ligands: 8YX.6
19 PLIP interactions:18 interactions with chain B, 1 interactions with chain D- Hydrophobic interactions: B:F.113
- Hydrogen bonds: B:S.43, B:M.44, B:Y.45, B:H.47, B:I.48, B:T.111, B:R.112, B:F.113, B:G.114, B:S.146, B:S.146, B:S.146, B:G.148, B:T.149, B:G.150, B:G.151, D:Y.176
- Salt bridges: B:H.47
FMN.7: 25 residues within 4Å:- Chain A: Y.176
- Chain B: D.125, G.128, H.166
- Chain C: S.43, M.44, Y.45, G.46, H.47, I.48, E.49, P.110, T.111, R.112, F.113, G.114, S.146, T.147, G.148, T.149, G.150, G.151, G.152, A.199
- Ligands: 8YX.3
19 PLIP interactions:18 interactions with chain C, 1 interactions with chain A- Hydrophobic interactions: C:F.113
- Hydrogen bonds: C:S.43, C:M.44, C:Y.45, C:H.47, C:I.48, C:T.111, C:R.112, C:F.113, C:G.114, C:S.146, C:S.146, C:G.148, C:T.149, C:G.150, C:G.151
- Water bridges: C:T.149, A:Y.176
- Salt bridges: C:H.47
FMN.8: 25 residues within 4Å:- Chain A: D.125, G.128, H.166
- Chain B: Y.176
- Chain D: S.43, M.44, Y.45, G.46, H.47, I.48, E.49, P.110, T.111, R.112, F.113, G.114, S.146, T.147, G.148, T.149, G.150, G.151, G.152, A.199
- Ligands: 8YX.1
23 PLIP interactions:23 interactions with chain D- Hydrophobic interactions: D:F.113, D:F.113
- Hydrogen bonds: D:S.43, D:M.44, D:Y.45, D:G.46, D:H.47, D:I.48, D:T.111, D:F.113, D:G.114, D:S.146, D:S.146, D:S.146, D:G.148, D:T.149, D:T.149, D:G.150, D:G.151, D:G.151
- Water bridges: D:R.112, D:R.112
- Salt bridges: D:H.47
- 1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zambelloni, R. et al., Crystal structures of WrbA, a spurious target of the salicylidene acylhydrazide inhibitors of type III secretion in Gram-negative pathogens, and verification of improved specificity of next-generation compounds. Microbiology (Reading, Engl.) (2022)
- Release Date
- 2022-08-03
- Peptides
- NAD(P)H dehydrogenase (quinone): ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.33 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x 8YX: 2-azanyl-4,6-bis(bromanyl)phenol(Non-covalent)
- 4 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
- 1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Zambelloni, R. et al., Crystal structures of WrbA, a spurious target of the salicylidene acylhydrazide inhibitors of type III secretion in Gram-negative pathogens, and verification of improved specificity of next-generation compounds. Microbiology (Reading, Engl.) (2022)
- Release Date
- 2022-08-03
- Peptides
- NAD(P)H dehydrogenase (quinone): ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D