SMTL ID : 7qo8.1

Structure of Protease1 from Pyrococcus horikoshii in space group 19 with a hexamer in the asymmetric unit

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

homo-hexamer

Ligands

8 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 1 residues within 4Å: Chain A: R.149 2 PLIP interactions: 2 interactions with chain A Water bridges: A:E.138 Salt bridges: A:R.149 SO4.2: 1 residues within 4Å: Chain B: R.149 2 PLIP interactions: 2 interactions with chain B Water bridges: B:E.138 Salt bridges: B:R.149 SO4.3: 4 residues within 4Å: Chain B: R.113, I.128, N.129, G.131 1 PLIP interactions: 1 interactions with chain B Salt bridges: B:R.113 SO4.4: 1 residues within 4Å: Chain C: R.149 3 PLIP interactions: 3 interactions with chain C Water bridges: C:E.138, C:R.149 Salt bridges: C:R.149 SO4.5: 1 residues within 4Å: Chain D: R.149 1 PLIP interactions: 1 interactions with chain D Salt bridges: D:R.149 SO4.6: 1 residues within 4Å: Chain E: R.149 3 PLIP interactions: 3 interactions with chain E Water bridges: E:R.149, E:R.149 Salt bridges: E:R.149 SO4.7: 1 residues within 4Å: Chain F: R.149 5 PLIP interactions: 5 interactions with chain F Water bridges: F:E.138, F:R.149, F:R.149, F:R.149 Salt bridges: F:R.149 SO4.8: 1 residues within 4Å: Chain F: R.113 2 PLIP interactions: 2 interactions with chain F Hydrogen bonds: F:G.110 Salt bridges: F:R.113

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gabel, F. et al., Medical contrast agents as promising tools for biomacromolecular SAXS experiments. Acta Crystallogr D Struct Biol (2022)

Release Date

2022-03-30

Peptides

Deglycase PH1704: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

Deglycase PH1704

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