SMTL ID : 7r70.1 (1 other biounit)

Crystal Structure of the UbArk2C fusion protein

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: C.134, E.142, H.154, C.157 Ligands: ZN.4 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.142 GOL.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

2 x ZN: ZINC ION(Non-covalent)

ZN.3: 4 residues within 4Å: Chain A: C.149, H.151, C.168, C.171 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.149, A:H.151, A:C.168, A:C.171 ZN.4: 5 residues within 4Å: Chain A: C.131, C.134, H.154, C.157 Ligands: GOL.1 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.131, A:C.134, A:H.154, A:C.157

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Paluda, A. et al., Ubiquitin and a charged loop regulate the ubiquitin E3 ligase activity of Ark2C. Nat Commun (2022)

Release Date

2022-03-09

Peptides

Ubiquitin,E3 ubiquitin-protein ligase RNF165: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ubiquitin,E3 ubiquitin-protein ligase RNF165

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