SMTL ID : 7udo.1

Crystal structure of designed helical repeat protein RPB_LRP2_R4 (proteolysis fragment?), forming pseudopolymeric filaments

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 2 residues within 4Å: Chain A: E.47, F.50 No protein-ligand interaction detected (PLIP) EDO.2: 2 residues within 4Å: Chain A: E.90, F.93 No protein-ligand interaction detected (PLIP) EDO.3: 2 residues within 4Å: Chain A: E.4, L.51 No protein-ligand interaction detected (PLIP) EDO.4: 3 residues within 4Å: Chain A: E.132, E.133, F.136 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.132, A:E.133

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.5: 1 residues within 4Å: Chain A: D.153 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.153, A:D.153, A:D.153

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wu, K. et al., De novo design of modular peptide-binding proteins by superhelical matching. Nature (2023)

Release Date

2023-03-22

Peptides

Designed helical repeat protein (DHR) RPB_LRP2_R4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Designed helical repeat protein (DHR) RPB_LRP2_R4

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