SMTL ID : 7v6u.1 (1 other biounit)

Crystal structure of bacterial peptidase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.14 Å

Oligo State

monomer

Ligands

1 x MLT: D-MALATE(Non-covalent)

MLT.1: 9 residues within 4Å: Chain A: Y.26, L.28, D.37, S.38, S.39, S.57, T.58, T.86, R.88 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.28, A:T.86 Hydrogen bonds: A:S.38, A:S.39, A:S.39, A:S.39, A:S.39, A:T.58 Water bridges: A:D.37

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: F.50, G.51, L.52 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:F.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lee, W.C. et al., The crystal structure of bacterial DD-endopeptidase. To be published

Release Date

2022-08-24

Peptides

Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase

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