SMTL ID : 8dyr.1

BRD4-D1 in complex with BET inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.47 Å

Oligo State

monomer

Ligands

1 x U59: (4P,6P)-4-[2-(cyclopropylmethoxy)-5-(methanesulfonyl)phenyl]-6-[1-(2-fluoroethyl)-1H-1,2,3-triazol-4-yl]-2-methylisoquinolin-1(2H)-one(Non-covalent)

U59.1: 17 residues within 4Å: Chain A: W.40, P.41, F.42, Q.44, P.45, V.46, D.47, K.50, L.51, L.53, Y.56, C.95, Y.98, N.99, D.104, I.105, M.108 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:W.40, A:L.51, A:L.53, A:I.105 Hydrogen bonds: A:N.99 Halogen bonds: A:L.51

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 8 residues within 4Å: Chain A: I.59, I.60, K.61, T.62, P.63, T.90, N.94, I.97 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:I.59, A:K.61, A:T.62, A:T.62, A:T.62, A:N.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dickmann, C.G.F. et al., Bromodomain and extraterminal protein-targeted probe enables tumour visualisation in vivo using positron emission tomography. Chem.Commun.(Camb.) (2023)

Release Date

2023-03-29

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Bromodomain-containing protein 4

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