SMTL ID : 8tzi.1

Human equilibrative nucleoside transporter-1, JH-ENT-01 bound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

6 x OLC: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate

OLC.1: 2 residues within 4Å: Chain A: H.361 Ligands: OLC.2 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:H.361 OLC.2: 5 residues within 4Å: Chain A: H.361, A.363, W.364, F.367 Ligands: OLC.1 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:A.363, A:W.364, A:W.364, A:F.367 Salt bridges: A:H.361 OLC.3: 4 residues within 4Å: Chain A: L.130, L.135, P.139, I.143 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.130, A:I.143 OLC.4: 3 residues within 4Å: Chain A: L.138, V.142, I.143 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:V.142, A:I.143 OLC.5: 5 residues within 4Å: Chain A: R.106, I.107, P.108, V.111 Ligands: OLC.6 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.106 OLC.6: 5 residues within 4Å: Chain A: S.110, V.111, L.114, P.228 Ligands: OLC.5 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:V.111, A:L.114, A:L.114 Hydrogen bonds: A:S.110

1 x U00: 3-[4-[3-[3,4-dimethoxy-5-[[4-[oxidanyl(oxidanylidene)-$l^{4}-azanyl]phenyl]methoxy]phenyl]carbonyloxypropyl]-1,4-diazepan-1-yl]propyl 3,4,5-trimethoxybenzoate

U00.7: 28 residues within 4Å: Chain A: T.26, L.27, W.30, N.31, M.34, T.35, T.37, M.85, T.86, L.93, I.120, I.151, N.152, G.155, L.158, Q.159, G.185, A.188, S.189, M.192, I.273, F.276, P.277, F.303, N.307, R.314, L.407, L.411 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:W.30, A:W.30, A:W.30, A:M.34, A:T.35, A:F.303, A:L.411, A:L.411 Hydrogen bonds: A:Q.159, A:N.307 Water bridges: A:R.314

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wright, N.J. et al., Rational ENT1 inhibition as a pathway for neuropathic pain relief. To Be Published

Release Date

2024-08-28

Peptides

Equilibrative nucleoside transporter 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
Show / Hide

Equilibrative nucleoside transporter 1

Related Entries With Identical Sequence