SMTL ID : 8zwq.1 (1 other biounit)

pseudorabies virus dUTPase structure

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.23 Å

Oligo State

homo-dimer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: S.173 Ligands: UMP.2 No protein-ligand interaction detected (PLIP)

1 x UMP: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE(Non-covalent)

UMP.2: 11 residues within 4Å: Chain A: K.54, I.83, V.84, D.85, F.88, D.133, A.134, G.135, S.173, Q.214 Ligands: MG.1 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:K.54, A:D.85, A:D.85, A:A.134, A:G.135, A:Q.214, A:Q.214

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, Y., Structural definition of pseudorabies virus dUTPase reveals a novel folding dimer in the herpesviruses family. To Be Published

Release Date

2025-06-18

Peptides

dUTPase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

dUTPase

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