SMTL ID : 9aro.1 (1 other biounit)

Crystal structure of AF9 YEATS domain in complex with acetylated at K1007 MOZ

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x FMT: FORMIC ACID(Non-functional Binders)

FMT.1: 2 residues within 4Å: Chain A: P.84, R.99 No protein-ligand interaction detected (PLIP) FMT.2: 3 residues within 4Å: Chain A: S.4, C.5, A.6 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Q.8

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 5 residues within 4Å: Chain A: C.66, D.68, P.69, P.70, K.72 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.72 PEG.4: 3 residues within 4Å: Chain B: S.4, N.125, N.126 No protein-ligand interaction detected (PLIP)

2 x LEU- THR- ALY- PRO: Acetylated Peptide from Histone acetyltransferase KAT6A(Non-covalent)

LEU-THR-ALY-PRO.5: 9 residues within 4Å: Chain B: F.28, H.56, S.58, F.59, G.77, Y.78, A.79, G.80, F.81 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:F.28, B:F.59, B:Y.78, B:Y.78 Hydrogen bonds: B:S.58, B:S.58, B:Y.78, B:A.79, B:G.80, B:G.80 Water bridges: B:L.106 LEU-THR-ALY-PRO.6: 8 residues within 4Å: Chain A: F.28, H.56, S.58, F.59, G.77, Y.78, A.79, G.80 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.28, A:F.59, A:Y.78, A:A.79 Hydrogen bonds: A:S.58, A:S.58, A:Y.78, A:A.79, A:G.80, A:G.80

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Becht, D.C. et al., Crystal structure of AF9 YEATS domain in complex with acetylated at K1007 MOZ. To Be Published

Release Date

2025-01-22

Peptides

Protein AF-9: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Protein AF-9

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