SMTL ID : 9eyd.1

Cryo-EM structure of Pseudomonas aeruginosa lysine-specific permenase (LysP).

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 3.68 Å

Oligo State

hetero-1-1-mer

Ligands

1 x LYS: LYSINE(Non-covalent)

LYS.1: 10 residues within 4Å: Chain A: G.19, T.20, G.21, N.92, T.96, E.100, F.203, S.204, Q.206, S.365 11 PLIP interactions: 9 interactions with chain A, 2 Ligand-Ligand interactions Hydrophobic interactions: A:T.96, A:F.203 Hydrogen bonds: A:T.20, A:G.21, A:N.92, A:T.96, A:T.96, A:Q.206, A:Q.206, K.1, K.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nji, E. et al., Structural insights into the lysine-specific uptake mechanism for extremely low pH regulation by bacteria. To Be Published

Release Date

2025-10-29

Peptides

Lysine-specific permease: A
Nanobody CA5755: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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Lysine-specific permease

Nanobody CA5755