SMTL ID : 9na6.4 (3 other biounits)

IRAK4 in Complex with Compound 34

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.14 Å

Oligo State

monomer

Ligands

1 x 01: (6P)-4-{[(1S)-1-cyanoethyl]amino}-6-[(8S)-3-cyanopyrrolo[1,2-b]pyridazin-7-yl]-N-[(2S)-2-fluoro-3-hydroxy-3-methylbutyl]pyridine-3-carboxamide

01.1: 18 residues within 4Å: Chain A: M.36, G.37, V.44, A.55, K.57, Y.106, V.107, Y.108, M.109, P.110, N.111, G.112, S.113, D.116, R.117, T.124, L.162, D.173 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:A.55, A:Y.106, A:Y.106, A:Y.106, A:T.124, A:L.162 Hydrogen bonds: A:M.36, A:M.109, A:M.109, A:G.112, A:D.173 Water bridges: A:K.57, A:S.113, A:D.116, A:R.117

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 2 residues within 4Å: Chain A: D.266, S.267 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.267, A:S.267 SO4.3: 4 residues within 4Å: Chain A: H.282, E.283, K.284, K.287 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.283, A:K.284 Salt bridges: A:H.282, A:K.284, A:K.287 SO4.4: 3 residues within 4Å: Chain A: F.9, H.10, S.11 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:F.9, A:S.11 Salt bridges: A:H.10

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ammann, S.E. et al., Discovery of Edecesertib (GS-5718): A Potent, Selective Inhibitor of IRAK4. J.Med.Chem. (2025)

Release Date

2025-05-28

Peptides

Interleukin-1 receptor-associated kinase 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

Interleukin-1 receptor-associated kinase 4

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