SMTL ID : 9ogd.1

Cryo-EM structure of human exportin-1 conjugated with selinexor and bound to human ASB8(R197A)-ELOB/C

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-mer

Ligands

1 x V6A: selinexor, bound form(Covalent)

V6A.1: 18 residues within 4Å: Chain A: L.527, C.530, E.531, K.539, I.542, A.543, I.546, M.547, V.550, F.563, T.566, V.567, K.570, L.571, F.574 Chain B: A.179, L.180, A.183 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.527, A:I.546, A:K.570, A:F.574 Hydrogen bonds: A:K.570 Halogen bonds: A:A.543

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wing, C.E. et al., SINE compounds activate exportin-1 degradation via an allosteric mechanism. To Be Published

Release Date

2025-11-26

Peptides

Exportin-1: A
Ankyrin repeat and SOCS box protein 8: B
Elongin-C: C
Elongin-B: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
E

D
F

Exportin-1

Ankyrin repeat and SOCS box protein 8

Elongin-C

Elongin-B

Related Entries With Identical Sequence