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3C-like proteinase nsp5 (3CL-PRO) | P0DTD1 PRO_0000449623

Created: May 5, 2023 at 21:34

Model Results

Order by:
Model 02
Oligo-State
Homo-dimer
(matching prediction)
GMQE
0.97
QMEANDisCo Global:
0.91 ± 0.05
Ligands
2 x T8J
QMEANDisCo Local
QMEAN Z-Scores
Template
5rfv.1.B 3C-like proteinase
PanDDA analysis group deposition -- Crystal Structure of SARS-CoV-2 main protease in complex with PCM-0102306
Seq Identity
100.00%
Coverage
Model-Template Alignment
Model 04
Oligo-State
Homo-dimer
(matching prediction)
GMQE
0.97
QMEANDisCo Global:
0.91 ± 0.05
Ligands
2 x HWH
QMEANDisCo Local
QMEAN Z-Scores
Template
5r7z.1.B 3C-like proteinase
PanDDA analysis group deposition -- Crystal Structure of SARS-CoV-2 main protease in complex with Z1220452176
Seq Identity
100.00%
Coverage
Model-Template Alignment
Model 05
Oligo-State
Homo-dimer
(matching prediction)
GMQE
0.97
QMEANDisCo Global:
0.89 ± 0.05
Ligands
QMEANDisCo Local
QMEAN Z-Scores
Template
6lu7.1.B 3C-like proteinase
The crystal structure of COVID-19 main protease in complex with an inhibitor N3
Seq Identity
100.00%
Coverage
Model-Template Alignment
Model 06
Oligo-State
Homo-dimer
(matching prediction)
GMQE
0.96
QMEANDisCo Global:
0.89 ± 0.05
Ligands
2 x DTZ
QMEANDisCo Local
QMEAN Z-Scores
Template
2z9j.1.A 3C-like proteinase
Complex structure of SARS-CoV 3C-like protease with EPDTC
Seq Identity
96.08%
Coverage
Model-Template Alignment
Model 01
Oligo-State
Homo-dimer
(matching prediction)
GMQE
0.95
QMEANDisCo Global:
0.88 ± 0.05
Ligands
1 x GLY, 2 x O6K
QMEANDisCo Local
QMEAN Z-Scores
Template
6y2g.1.A 3C-like proteinase
Crystal structure (orthorhombic form) of the complex resulting from the reaction between SARS-CoV-2 (2019-nCoV) main protease and tert-butyl (1-((S)-1-(((S)-4-(benzylamino)-3,4-dioxo-1-((S)-2-oxopyrrolidin-3-yl)butan-2-yl)amino)-3-cyclopropyl-1-oxopropan-2-yl)-2-oxo-1,2-dihydropyridin-3-yl)carbamate (alpha-ketoamide 13b)
Seq Identity
100.00%
Coverage
Model-Template Alignment
Model 03
Oligo-State
Homo-dimer
(matching prediction)
GMQE
0.95
QMEANDisCo Global:
0.87 ± 0.05
Ligands
2 x AZP
QMEANDisCo Local
QMEAN Z-Scores
Template
2a5i.1.A 3C-like peptidase
Crystal structures of SARS coronavirus main peptidase inhibited by an aza-peptide epoxide in the space group C2
Seq Identity
96.08%
Coverage
Model-Template Alignment