SMTL ID : 4mbj.1

Human B-Raf Kinase Domain in Complex with an Imidazopyridine-based Inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.60 Å

Oligo State

homo-dimer

Ligands

2 x DFS: 2,6-difluoro-N-(1H-imidazo[4,5-b]pyridin-6-yl)-3-[(propylsulfonyl)amino]benzamide(Non-covalent)

DFS.1: 16 residues within 4Å: Chain A: I.44, V.52, A.62, K.64, L.86, L.95, I.108, T.110, Q.111, W.112, C.113, G.174, D.175, F.176, G.177, L.178 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:K.64, A:L.86, A:I.108, A:L.178, A:L.178 Hydrogen bonds: A:T.110, A:T.110, A:C.113, A:D.175, A:G.177 pi-Stacking: A:W.112, A:F.164 DFS.2: 16 residues within 4Å: Chain B: I.44, V.52, A.62, V.63, K.64, L.86, L.95, I.108, T.110, Q.111, W.112, C.113, G.174, D.175, F.176, G.177 15 PLIP interactions: 15 interactions with chain B Hydrophobic interactions: B:A.62, B:K.64, B:L.86, B:L.95, B:L.95, B:T.110, B:F.176 Hydrogen bonds: B:T.110, B:C.113, B:G.174, B:F.176, B:G.177 pi-Stacking: B:W.112, B:F.164 pi-Cation interactions: B:K.64

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Newhouse, B.J. et al., Imidazo[4,5-b]pyridine inhibitors of B-Raf kinase. Bioorg.Med.Chem.Lett. (2013)

Release Date

2013-10-02

Peptides

Serine/threonine-protein kinase B-raf: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Serine/threonine-protein kinase B-raf