SMTL ID : 8ju5.1

Structure of human TRPV4 with antagonist A1

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-tetramer

Ligands

2 x F3L: 4-[(3~{S},4~{S})-4-(aminomethyl)-1-(5-chloranylpyridin-2-yl)sulfonyl-4-oxidanyl-pyrrolidin-3-yl]oxy-2-fluoranyl-benzenecarbonitrile

F3L.1: 11 residues within 4Å: Chain B: S.470, N.474, F.524, T.527, N.528, D.531, Q.550, Y.553, Y.591, F.592, D.743 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:F.524, B:T.527, B:Y.553, B:Y.591 Hydrogen bonds: B:T.527, B:D.743, B:D.743 Salt bridges: B:D.531, B:D.743 F3L.2: 11 residues within 4Å: Chain D: S.470, N.474, F.524, N.528, D.546, Q.550, Y.553, Y.591, F.592, D.743, I.744 5 PLIP interactions: 5 interactions with chain D Hydrophobic interactions: D:Y.553, D:Y.591 Hydrogen bonds: D:D.743 Salt bridges: D:D.546, D:D.743

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fan, J. et al., Structural Pharmacology of TRPV4 Antagonists. Adv Sci (2024)

Release Date

2024-05-08

Peptides

Transient receptor potential cation channel subfamily V member 4,3C-GFP: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

C
C

D
B

Membrane

We predict this structure to be a membrane protein.
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Transient receptor potential cation channel subfamily V member 4,3C-GFP

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