Welcome to the SWISS-MODEL Repository

The SWISS-MODEL Repository is a database of annotated three-dimensional comparative protein structure models generated by the fully automated homology-modelling pipeline SWISS-MODEL.

Example Queries:
[P23298]  [GLDA_ECOLI]  [IPI00743503]  [NP_416402]  [GI:28872740]  [ENTREZ:54401]  [Sequence]

List of model organisms regularly updated in Repository

The proteomes of the following organisms are regularly updated in SWISS-MODEL Repository. A reference proteome is the complete proteome of a representative, well-studied model organism or an organism of interest for biomedical research. Reference proteomes are retrieved from the UniProt database.

Organism Taxonomy Number of models
Human Homo Sapiens 106761
Mouse Mus musculus 101133
Caenorhabditis elegans C. elegans 36749
Escherichia coli (strain K12) E.coli K12 5585
Mouse-ear cress A. thaliana 70984
Fruit Fly D. melanogaster 42970
Bakers Yeast S. cerevisiae 8807
Caulobacter crescentus C. crescentus 5137
Mycobacterium tuberculosis M. tuberculosis 5493
Pseudomonas aeruginosa P. aeruginosa 7853
Staphylococcus aureus S. aureus 3168
Plasmodium falciparum P. falciparum 6437

Statistics based on UniProt release 2015_03

The current release of the SWISS-MODEL Repository consists of 3180586 model entries for 2304522 unique sequences in the UniProt database (2015_03). In the last update cycle (2015-03-23) 105766 unique sequences were considered for revision. See the [release notes] of the last updates.

NOTE: The SWISS-MODEL repository contains theoretically calculated models, which may contain significant errors.

SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.