Welcome to the SWISS-MODEL Repository

The SWISS-MODEL Repository is a database of annotated three-dimensional comparative protein structure models generated by the fully automated homology-modelling pipeline SWISS-MODEL.

Example Queries:
[P23298]  [GLDA_ECOLI]  [IPI00743503]  [NP_416402]  [GI:28872740]  [ENTREZ:54401]  [Sequence]

List of model organisms regularly updated in Repository

The proteomes of the following organisms are regularly updated in SWISS-MODEL Repository. A reference proteome is the complete proteome of a representative, well-studied model organism or an organism of interest for biomedical research. Reference proteomes are retrieved from the UniProt database.

Organism Taxonomy Number of models
Human Homo Sapiens 110843
Mouse Mus musculus 99593
Caenorhabditis elegans C. elegans 35707
Escherichia coli (strain K12) E.coli K12 5446
Mouse-ear cress A. thaliana 65465
Fruit Fly D. melanogaster 42605
Bakers Yeast S. cerevisiae 8329
Caulobacter crescentus C. crescentus 4998
Mycobacterium tuberculosis M. tuberculosis 6389
Pseudomonas aeruginosa P. aeruginosa 7660
Staphylococcus aureus S. aureus 3068
Plasmodium falciparum P. falciparum 6060

Statistics based on UniProt release 2014_06

The current release of the SWISS-MODEL Repository consists of 3164163 model entries for 2300799 unique sequences in the UniProt database (2014_06). In the last update cycle (2014-06-24) 105355 unique sequences were considered for revision. See the [release notes] of the last updates.

NOTE: The SWISS-MODEL repository contains theoretically calculated models, which may contain significant errors.

SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.