Welcome to the SWISS-MODEL Repository

The SWISS-MODEL Repository is a database of annotated three-dimensional comparative protein structure models generated by the fully automated homology-modelling pipeline SWISS-MODEL.

Example Queries:
[P23298]  [GLDA_ECOLI]  [IPI00743503]  [NP_416402]  [GI:28872740]  [ENTREZ:54401]  [Sequence]

List of model organisms regularly updated in Repository

The proteomes of the following organisms are regularly updated in SWISS-MODEL Repository. A reference proteome is the complete proteome of a representative, well-studied model organism or an organism of interest for biomedical research. Reference proteomes are retrieved from the UniProt database.

Organism Taxonomy Number of models
Human Homo Sapiens 113595
Mouse Mus musculus 104664
Caenorhabditis elegans C. elegans 38759
Escherichia coli (strain K12) E.coli K12 5628
Mouse-ear cress A. thaliana 69806
Fruit Fly D. melanogaster 45465
Bakers Yeast S. cerevisiae 8996
Caulobacter crescentus C. crescentus 5190
Mycobacterium tuberculosis M. tuberculosis 5464
Pseudomonas aeruginosa P. aeruginosa 7942
Staphylococcus aureus S. aureus 3165
Plasmodium falciparum P. falciparum 6592

Statistics based on UniProt release 2014_07

The current release of the SWISS-MODEL Repository consists of 3185890 model entries for 2301404 unique sequences in the UniProt database (2014_07). In the last update cycle (2014-07-15) 107566 unique sequences were considered for revision. See the [release notes] of the last updates.

NOTE: The SWISS-MODEL repository contains theoretically calculated models, which may contain significant errors.

SWISS-MODEL is developed by the Protein Structure Bioinformatics group at the SIB - Swiss Institute of Bioinformatics & the Biozentrum University of Basel. © 2011.