Q04660 (ERB1_YEAST) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast)

Ribosome biogenesis protein ERB1 UniProtKBInterProSTRINGInteractive Modelling

807 aa; Sequence (Fasta)

Available Structures

25 Experimental Structures

DescriptionPDB IDOligo-stateRangeSeq id (%)Ligands
State E1 nucleolar 60S ribosome biogenesis intermediate - Composite model
7r7a
 Heteromer
P04456; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX41; P0CX43; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25582; P25808; P26784; P33201; P36049; P36105; P38061; P38202; P38779; P39744; P40007; P40010; P40078; P40693; P40991; P43586; P49166; P49167; P53261; P53927; P87262; Q02326; Q02753; Q02892; Q03532; Q07896; Q07915; Q08235; Q08962; Q12024; Q12522; Q12690; 		122-807
99.852×ZN;
Download
Structure Assessment
State E2 nucleolar 60S ribosomal biogenesis intermediate - Composite model
7nac
 Heteromer
P04456; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX41; P0CX43; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25582; P25808; P26784; P33201; P36049; P36105; P38061; P38202; P38779; P39744; P40007; P40010; P40078; P40693; P40991; P43586; P49166; P49167; P53261; P53927; P87262; Q02326; Q02753; Q02892; Q03532; Q04031; Q07896; Q07915; Q08235; Q08962; Q12024; Q12522; Q12690; 		122-807
99.852×ZN; 1×SAH;
Download
Structure Assessment
60S ribosome biogenesis intermediate (Dbp10 post-catalytic structure - Overall map)
8v87
 Heteromer
P04456; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX41; P0CX43; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25582; P26784; P33201; P36049; P36105; P38061; P38202; P38779; P39744; P40007; P40010; P40078; P40693; P40991; P43586; P49166; P49167; P53261; P53927; P87262; Q02326; Q02892; Q03532; Q07896; Q07915; Q08235; Q08962; Q12024; Q12389; Q12522; Q12690; 		122-807
100.01×ADP; 2×MG; 1×GDP; 1×K; 2×ZN;
Download
Structure Assessment
State D architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pr…
6em5
 Heteromer
O14455; P04456; P05737; P05738; P05740; P05743; P05744; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX41; P0CX49; P0CX82; P0CX84; P10664; P10962; P14120; P14126; P17076; P25582; P26784; P33201; P35178; P36049; P36105; P38061; P38202; P38779; P38805; P40007; P40010; P40078; P40693; P40991; P49166; P49167; P53136; P53261; P53927; P87262; Q02326; Q02753; Q02892; Q03532; Q07896; Q07915; Q08235; Q08962; Q12024; Q12522; Q12690; 		125-807
100.0
Download
Structure Assessment
State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes
6elz
 Heteromer
P02406; P04456; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX41; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25582; P26784; P33201; P36049; P36105; P38061; P38202; P38779; P40007; P40010; P40078; P40693; P40991; P49166; P49167; P53261; P53927; P87262; Q02326; Q02753; Q02892; Q03532; Q07896; Q07915; Q08235; Q08962; Q12024; Q12522; Q12690; 		125-807
100.01×ZN;
Download
Structure Assessment
Nog1-TAP associated immature ribosomal particle population E from S. cerevisiae
7ohr
 Heteromer
P04456; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX41; P0CX49; P0CX82; P0CX84; P10664; P14120; P14126; P17076; P25582; P26784; P33201; P36049; P36105; P38061; P38779; P40007; P40010; P40078; P40693; P40991; P49166; P49167; P53261; P53927; P87262; Q02326; Q02892; Q03532; Q07896; Q07915; Q08235; Q08962; Q12024; Q12522; Q12690; 		125-807
100.01×ZN;
Download
Structure Assessment
Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL2 expression shut down…
7ohv
 Heteromer
P02406; P04456; P05737; P05738; P05740; P05743; P05744; P05745; P05748; P05749; P0C2H6; P0C2H8; P0CX23; P0CX41; P0CX49; P0CX82; P0CX84; P10664; P14126; P17076; P25582; P26784; P33201; P36049; P36105; P38061; P38779; P40007; P40078; P40693; P49166; P49167; P53261; P53927; Q02326; Q02892; Q03532; Q07915; Q08235; Q12024; Q12522; Q12690; 		130-807
100.01×ZN;
Download
Structure Assessment
Yeast nucleolar pre-60S ribosomal subunit (state 3)
6cb1
 Heteromer
P04456; P05737; P05740; P05743; P05744; P05745; P05748; P0C2H6; P0CX23; P0CX49; P0CX84; P10664; P10962; P14120; P17076; P26784; P35178; P36105; P38061; P38779; P38805; P40007; P40693; P49166; P49167; P53136; P53261; P53927; P87262; Q02326; Q03532; Q08235; Q12690; 		239-807
85.742×ZN;
Download
Structure Assessment
State E2 nucleolar 60S ribosomal biogenesis intermediate - Spb4 local refinement model
7nad
 Heteromer
P04456; P05740; P05749; P0C2H6; P0C2H8; P0CX41; P0CX82; P14120; P14126; P17076; P25582; P25808; P39744; P40693; P49166; P49167; P53261; P87262; Q02892; Q04031; Q07896; Q07915; Q12024; 		392-807
99.361×ZN;
Download
Structure Assessment
State E1 nucleolar 60S ribosome biogenesis intermediate - Spb4 local model
7r72
 Heteromer
P04456; P05740; P05749; P0C2H6; P0C2H8; P0CX82; P14120; P14126; P17076; P25582; P25808; P39744; P40693; P49166; P49167; P53261; P87262; Q02892; Q07896; Q07915; Q12024; 		392-807
99.361×ZN;
Download
Structure Assessment
60S ribosome biogenesis intermediate (Dbp10 catalytic structure - Overall map)
8v84
 Heteromer
P05737; P05738; P05740; P05743; P05744; P05745; P05748; P0CX23; P0CX41; P0CX43; P0CX49; P0CX84; P10664; P10962; P14126; P17076; P26784; P33201; P35178; P36049; P36080; P36105; P38061; P38779; P38789; P38805; P40007; P40078; P40693; P40991; P43586; P49166; P53136; P53261; P53927; Q02326; Q02892; Q03532; Q06511; Q07915; Q08235; Q08962; Q12389; Q12522; Q12690; 		125-399
100.01×GDP; 1×MG; 2×ZN;
Download
Structure Assessment
60S ribosome biogenesis intermediate (Dbp10 pre-catalytic structure - Overall map)
8v83
 Heteromer
P05737; P05738; P05740; P05743; P05744; P05745; P05748; P0CX23; P0CX41; P0CX43; P0CX49; P0CX84; P10664; P10962; P14126; P17076; P26784; P33201; P35178; P36049; P36080; P36105; P38061; P38779; P38789; P38805; P40007; P40078; P40693; P40991; P43586; P49166; P53136; P53261; P53927; Q02326; Q02892; Q03532; Q06511; Q07915; Q08235; Q08962; Q12522; Q12690; 		125-399
100.02×ZN;
Download
Structure Assessment
State E2 nucleolar 60S ribosome biogenesis intermediate - Foot region model
7r6q
 Heteromer
P04456; P05745; P05748; P0C2H6; P0CX84; P17076; P25582; P38779; P40007; P40693; P53261; P53927; P87262; Q03532; Q12690; 		236-415
100
Download
Structure Assessment
Nog1-TAP associated immature ribosomal particle population F from S. cerevisiae
7ohs
 Heteromer
P05737; P05738; P05740; P05743; P05744; P05745; P05748; P0CX23; P0CX41; P0CX49; P0CX84; P10664; P10962; P14126; P17076; P26784; P33201; P35178; P36105; P38061; P38779; P38805; P40007; P40078; P40693; P49166; P53136; P53261; P53927; Q02326; Q02892; Q03532; Q07915; Q08235; Q12522; Q12690; 		239-399
1002×ZN;
Download
Structure Assessment
Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut dow…
7ohw
 Heteromer
P05737; P05738; P05740; P05743; P05744; P05745; P05748; P0CX23; P0CX41; P0CX49; P0CX84; P10664; P10962; P14126; P17076; P26784; P33201; P35178; P36049; P36105; P38061; P38779; P38805; P40007; P40078; P40693; P49166; P53136; P53261; P53927; Q02326; Q02892; Q03532; Q08235; Q12522; Q12690; 		239-399
100.01×ZN;
Download
Structure Assessment
Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL25 expression shut dow…
7ohp
 Heteromer
P05737; P05738; P05740; P05743; P05744; P05745; P05748; P0CX23; P0CX41; P0CX49; P0CX84; P10664; P14126; P17076; P26784; P33201; P36105; P38061; P38779; P40007; P40078; P40693; P49166; P53261; P53927; Q02326; Q02892; Q03532; Q12522; Q12690; 		239-399
100.01×ZN;
Download
Structure Assessment
State C (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes
6em1
 Heteromer
O14455; P05737; P05738; P05740; P05743; P05744; P05748; P0CX23; P0CX41; P0CX49; P0CX84; P10664; P10962; P14126; P17076; P26784; P33201; P35178; P36049; P36105; P38061; P38202; P38779; P38805; P40007; P40010; P40078; P40693; P49166; P53136; P53261; P53927; Q02326; Q02892; Q03532; Q07915; Q08235; Q12522; Q12690; 		239-399
1002×ZN;
Download
Structure Assessment
Yeast co-transcriptional Noc1-Noc2 RNP assembly checkpoint intermediate
8e5t
 Heteromer
P05737; P05744; P05745; P05748; P0CX23; P0CX49; P10664; P10962; P17076; P26784; P35178; P36049; P36105; P38061; P38779; P39744; P40693; P53261; P53927; Q02326; Q03532; Q08235; Q12176; Q12690; 		239-395
100.033×MG; 1×ZN;
Download
Structure Assessment
Yeast nucleolar pre-60S ribosomal subunit (state 2)
6c0f
 Heteromer
P05737; P05740; P05743; P05744; P05745; P05748; P0CX23; P0CX41; P0CX49; P0CX84; P10664; P10962; P14126; P17076; P26784; P35178; P36080; P36105; P38061; P38779; P38789; P38805; P40007; P40693; P49166; P53136; P53261; P53927; Q02326; Q02892; Q03532; Q06511; Q07915; Q08235; Q12522; Q12690; 		239-395
53.53×ZN;
Download
Structure Assessment
State A architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pr…
6em3
 Heteromer
O14455; P05737; P05740; P05743; P05744; P05748; P0CX23; P0CX49; P0CX84; P10664; P10962; P17076; P26784; P35178; P36049; P36105; P38061; P38779; P38805; P40007; P40693; P49166; P53136; P53261; P53927; Q02326; Q03532; Q08235; Q12690; 		244-397
100.0
Download
Structure Assessment
State B architectural model (Nsa1-TAP Flag-Ytm1) - Visualizing the assembly pathway of nucleolar pr…
6em4
 Heteromer
O14455; P05737; P05740; P05743; P05744; P05748; P0CX23; P0CX41; P0CX49; P0CX84; P10664; P10962; P14126; P17076; P26784; P35178; P36049; P36105; P38061; P38779; P38805; P40007; P40693; P49166; P53136; P53261; P53927; Q02326; Q03532; Q07915; Q08235; Q12522; Q12690; 		244-397
100.0
Download
Structure Assessment
Nog1-TAP associated immature ribosomal particles from S. cerevisiae after rpL34 expression shut dow…
7ohx
 Heteromer
P05737; P05738; P05740; P05743; P05744; P05745; P05748; P0CX23; P0CX49; P0CX84; P10664; P10962; P14126; P17076; P26784; P33201; P35178; P36105; P38061; P38779; P38805; P40007; P40693; P49166; P53136; P53261; P53927; Q02326; Q02892; Q03532; Q07915; Q12522; Q12690; 		239-376
100.02×ZN;
Download
Structure Assessment
State E2 nucleolar 60S ribosomal intermediate - Model for Noc2/Noc3 region
7r6k
 Heteromer
P05745; P05748; P17076; P25582; P36049; P39744; P40078; P40991; P43586; P87262; Q04031; Q07896; Q08235; Q08962; 		139-244
100
Download
Structure Assessment
State E2 nucleolar 60S ribosomal biogenesis intermediate - L1 stalk local model
7r7c
 Heteromer
P0CX43; P25582; P36049; P40078; P40991; P43586; Q02892; Q08235; Q08962; 		153-215
100
Download
Structure Assessment
The carboxy-terminal domain of Erb1 is a seven-bladed beta-propeller that binds RNA.
4u7a
monomer416-807
100.02×EDO; 1×GOL; 1×EOH;
Download
Structure Assessment

1 SWISS-MODEL model

TemplateOligo-stateQMEANDisCoRangeLigandsTrg-Tpl Seq id (%)
8v87.1.hmonomer0.71122-807
100.00
Download
Model report
Structure Assessment