SMTL ID : 7nrr.2 (1 other biounit)

The structure of the SBP TarP_Csal in complex with caffeate

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.67 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)(Non-functional Binders)

MG.1: 3 residues within 4Å: Chain A: K.61, D.223, D.225 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.223, A:D.225, H2O.1, H2O.2, H2O.3 MG.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

1 x DHC: CAFFEIC ACID(Non-covalent)

DHC.3: 15 residues within 4Å: Chain A: F.12, F.13, W.69, V.71, Y.74, H.124, R.148, P.150, V.170, I.187, P.188, E.190, A.191, M.218, M.254 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:F.12, A:F.13, A:W.69, A:V.71, A:H.124, A:V.170, A:P.188, A:A.191 Hydrogen bonds: A:Y.74, A:Y.74, A:V.170, A:E.190, A:E.190 Salt bridges: A:R.148

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bisson, C. et al., The structural basis for high-affinity uptake of lignin-derived aromatic compounds by proteobacterial TRAP transporters. Febs J. (2022)

Release Date

2021-10-06

Peptides

TRAP dicarboxylate transporter-DctP subunit: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
BBB

TRAP dicarboxylate transporter-DctP subunit

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